Oreochromis niloticus (Nile tilapia): 102082360
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Entry
102082360 CDS
T06104
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
onl01001
]
102082360 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
onl04054
]
102082360 (ciita)
Enzymes [BR:
onl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102082360 (ciita)
Protein kinases [BR:
onl01001
]
Serine/threonine kinases: Other
TAF1 family
102082360 (ciita)
Pattern recognition receptors [BR:
onl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102082360 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_14
AAA_16
LRR_4
LRR_8
nSTAND3
LRR_At5g56370
nSTAND_NTPase5
AAA_22
NLRC4_HD2
GAGA_bind
NB-ARC
AAA
TsaE
Motif
Other DBs
NCBI-GeneID:
102082360
NCBI-ProteinID:
XP_005459511
Ensembl:
ENSONIG00000042007
UniProt:
A0A669CEL1
LinkDB
All DBs
Position
LG4:complement(12440881..12461569)
Genome browser
AA seq
1659 aa
AA seq
DB search
MAHFEEVLDEVRSALTWASPAEIRALLEGLVEEQIISEAYSKSLGLHRFTDGLTPELLCG
ESGWILGSDEPDGVFASRASSTHQHLSHGPLIKVRKGGSQSPSVDYHLTGSEFVPSVDDH
YSTRLEPETCSLYEDQVISRDKLIQELREGTAMDEHYPTQSLYSVPTVFDGRLALNDDIT
ELLTSAPSMQKPVSDSERVNQGNLEIEREWLEQIEEAARRIAVPLWQHWDKGRRMLQPLV
YYNTTGCSTSDNTVTYSEAQCAILDLEEEMELAAACRTLDACTGNFNTSFTLDDEEAADT
PEEFYYPLYDEVPTPGICMDPFKTFGLEGNASPVEACEATDSNNNITDNMGGLLDAWWPG
ETTDDLCCLTEDTQCGAGSALAQFTFQHLSPSFAPEDASVTAEDDMMAGVTENVYGTETW
DIDGVTGMKDTMESHCNVKMLEVDPNPITVALDLDLLLDDLADEINEKLLDVDSLFEYLE
LNDSLPHPSWPFDDLPTAAEVPITNSIEQIQKPKAKGQSRRRKRPRDSQPQLCSDESPKA
KSPKPSGQPKTKESQAKPAVESGSDPASGPSPAETLPIPVTTTPPRFFRVYPSQTGSAIP
IQIITISDSAGNPVQLSPPPPLIRFPIPGSATTPTYILVPTVSPPSKCQLPPLSPVDGTV
APVHMSSSPLGSLSETASKAMSPPCTSPVSPGNEMSPCKESPLPQSPKVLDIPQTVKDYI
QEAKAHMSQTYQDMETGLSLSSHYVDVQVSQREVIRSGKNTNKCLDKELVIKGDTDRQKT
MLALNQIFDGSNGERPRRYILLLGNAGMGKTTLIKKLCIDWSRDCIPQFDFVFLLDGKKL
SVTEPVYSLQTLLLNLSSSAPSCVDPEAVYAQVLAAPKRVLIIFDGFDELRHYETLLQAQ
EKDLTASLQKDSKAKTFTVRQLYSAILQRVLLPGCTLLLSTRPRGTASQLLRRTDSLLEM
CGFTPANVETYLSQYFSDPSVRESALESLKSMSYLNLLCWNPGLCRLVCLILEQSQSVDV
LPRTLTGLCHQVLCLKMVKDSRSTPTHTEAQAQSVEDTETQTSNTSQVKKCSKNNQAKSR
TQTRTSSRPQRAKKAHEQEAQVDKVDQDLKSSGGEAVTEDRELLSQLSTLAWEGVKANSS
ILPTGRDISAKVKAFGLRTGLFLSHHLRASPCLSSGAKEEGENETEAGETEQKTEHSERT
ANDITDHQNDQILLWANPFLQSYIAAVHLVLSRTVTDRSFLQTLPFQSGGKGRRRPQREE
LELTQRFAVGLLFHNRTELQRFHTHTETAFRDMVANKQGLVTKHLEGLSYADLSPSQILE
ACHYVYEASFTYNDGGRDAGRTRLVTHLAANLPEFLTFHGVQLSPPDVFTVQKALEQGGT
EGRRFCLDLEDSGIQICGLRALVGLNDINTYRSCIADTITLWQLLEQSDEESLLQRAVSK
FTIHPLKAKQVCHIEHLEKLVNIHIHKRLSDSSSESHSILSEGVPAVKELHKLEFELGPE
NGPLVLPKLWDLLPGLHNLQHLDLENSKIGDKGAEKLASALVSLPSLEILNLSQNCIGDE
GVKKLADTLKDLPNLHCLSLYSNMISDEGAESLAAVLPHMASLTDLDVKFNKLTDVGAQS
LGASLRNCTKIKTLRMWNQCIPFGVLERLIQQDSRILLH
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggctcattttgaggaggtcctggacgaagtccgctcggctcttacctgggcctcacct
gctgagatccgagctctgctggagggtctggtggaggagcagataatctcagaagcgtac
agcaagagcttgggtctgcatcgattcactgatgggctcacaccggagctgctttgtggg
gaatcagggtggatactgggatctgatgagcccgatggggtatttgcttctcgagcatct
agcacccaccagcacctcagccatggaccgctcattaaggtaaggaaaggtgggtcacag
tctccctccgttgactaccacctgacaggatcagagtttgtcccatcagtggatgatcat
tacagcacaagactggagccagagacttgctcactatatgaggatcaagttatttccaga
gataaactcattcaggaattgagggaggggacagcaatggacgaacactacccaacacaa
agcctctactctgtacccacagtgtttgatggcagacttgcattaaatgatgatataact
gaactgctgacaagtgcaccttcaatgcagaagccggtaagtgatagtgaaagggtaaat
caggggaatttggagattgagagggagtggttagaacagattgaagaggctgctaggcgc
atagctgtacctctgtggcagcactgggacaaaggaaggaggatgttacagcctttagtt
tattataacacaactggatgttcaactagtgataacacagtgacatacagtgaagcacaa
tgtgctattttagatctggaagaggaaatggagcttgcagccgcttgcaggacactcgat
gcgtgcaccggcaactttaacacaagcttcacgctggatgatgaggaagctgctgacaca
cctgaggagttctattaccctttatatgatgaggtgccgacacctggaatctgcatggat
cccttcaaaactttcggattagaaggaaatgcatcacctgtggaagcctgtgaagccaca
gactcaaacaacaacatcacagacaatatggggggcctcctggatgcgtggtggccaggc
gaaactacagacgacctgtgttgtctgactgaggacacacagtgtggcgcaggttcggcg
cttgcacaatttacttttcaacatttgagtccctcatttgcaccagaagatgcttcagtt
acagcggaagatgacatgatggcaggggtcacagaaaatgtttatggaacagaaacctgg
gacatagatggagtaacaggcatgaaggacactatggagtcacactgcaatgtcaagatg
ctggaagtggatcccaatcccatcacagttgctttggacttagatctgttgctagatgat
ttggctgatgagataaatgaaaaattgctggatgttgattccctctttgaatacttggaa
ctcaacgacagccttcctcatccctcatggccctttgatgacctccccacggcagctgag
gtacctatcaccaacagcattgagcagatacagaaacccaaagcaaaaggccaatcacga
aggagaaaaagaccgagagattctcagccacagctgtgctccgatgaaagccccaaagca
aaaagcccaaaaccatcaggtcaaccaaaaaccaaagagtcacaggctaagccagctgtt
gagtcaggcagtgatcccgcatcagggccgagtccagcagagactttaccaataccggtc
accaccactccaccaagattttttcgtgtctacccttcccaaacaggctcagcgattccc
attcagattatcactatctcagattccgctggaaatccagtccagctttctcctcctcct
ccactcattaggtttccaatccccggcagcgccactacacctacatatatattagttcct
actgtgtcaccaccctctaaatgccaattgccaccactctccccagtcgatggcacagtc
gctccggtccatatgagttcgtccccactgggttctctgtcagaaacagctagcaaagcc
atgtctcccccttgtacctcacctgtatccccaggcaatgaaatgtccccatgtaaggaa
tcacctcttcctcagtctcccaaggtccttgatattccacagactgtcaaggactacatt
caagaagctaaagctcacatgagtcaaacctaccaggatatggagacgggcctcagcctg
tcttctcattatgtagatgttcaagtgagccaaagagaggtaattcgctctgggaaaaat
acaaacaaatgcctggacaaggaactagtcatcaagggagacacagatcggcaaaagacc
atgctggcactgaatcagatctttgatggttcaaatggagaaagacccagacgatacatt
ttgctgcttggcaatgccggcatgggaaaaacaactctgatcaagaagctgtgtattgat
tggtccagagactgcatccctcagtttgactttgtattcctattagatggcaaaaaactg
agtgtgacagagccggtctacagccttcagacactcctgctcaacctctcctcctctgcc
ccatcctgtgtggacccagaagcagtgtatgctcaagtcctcgcagcccctaagcgtgtg
ctcatcatttttgatggttttgacgaattgcggcactatgaaactctacttcaagctcag
gaaaaagacctaacagcttcactgcaaaaagacagcaaggcaaagacttttacagtaagg
cagttgtattctgccattcttcaaagggtcctgcttccaggctgcactcttctactctcc
accaggccacggggaactgccagccagctgctcaggcgtacagacagccttctggagatg
tgcgggtttaccccggcaaatgtggaaacatatttgtcccagtacttctctgatcctagc
gtcagagaatcagctttggagagcctaaaaagcatgagctacctaaatcttctttgctgg
aaccccggactatgccggctggtgtgcttgattttagagcagtctcaaagtgtggatgtc
ctaccaagaactttaactgggctctgtcatcaggtgctgtgtttaaaaatggttaaagac
agcaggagtactcccacacacactgaagctcaggctcaatctgtagaagacactgagaca
caaacttcaaatacctctcaggtgaagaagtgttcgaaaaataatcaggcaaagtccaga
acacagacacgcacttcctctcgcccccaaagagcaaagaaggcacacgaacaggaggcg
caagtagacaaggtggatcaggatctcaagagcagtggcggagaagccgtaacggaggac
agggagttgttgtcccagctgagcactttggcctgggaaggggtcaaagccaactcttcc
atccttcccacaggacgggacatatctgccaaagtcaaggcgtttggcctgagaacaggc
ctctttctctctcaccacctgagagcgagtccatgcctctcaagtggtgccaaggaggaa
ggagaaaatgagacagaagctggagagacagaacagaagactgaacacagtgaaaggact
gccaatgatataactgatcaccaaaatgaccagatcctcttgtgggccaaccctttcctt
cagagttacattgcagcagttcatctggttttgtcaaggactgtaacagaccggtccttt
ctccagaccctccctttccagtctggagggaaaggtcgtcggcgacctcaaagggaggaa
cttgagctcactcagcgatttgcagttggcctcttgttccacaataggacagaactgcag
cgattccacacacatacagagacagcctttagagatatggtggctaacaagcaggggttg
gtaacaaaacacctggaagggctttcctacgctgaccttagtccctcccaaatcttggag
gcatgccactacgtctacgaggcgagttttacgtacaatgatggtggccgagacgctggc
aggacacggctggtgacacacctggcagcaaatcttccagagttcctgacgtttcatgga
gttcaactaagcccaccagatgtgttcactgttcagaaagcgcttgaacaggggggaact
gaaggcagacgtttctgtttggacctggaggactctggcatccagatctgtggacttaga
gctctggttggcctcaacgacatcaacacatacaggtcatgcattgctgacaccatcacc
ctctggcagctgctggagcagagtgacgaagaaagtctcctccagagggcagtgtccaag
ttcacaatccatcctctgaaagctaaacaggtgtgtcatatagagcacctggaaaagctg
gtgaacatacacattcacaagaggctatcagacagctccagcgagtctcactccatcctg
tctgagggagtgccggcagttaaagagctacacaagctggagtttgaacttggtccagaa
aatggtcctctggttcttccgaagctgtgggatctcctgccagggctgcataacctacag
cacttggacctagagaacagcaagatcggggacaaaggagcagagaagctggccagtgcg
ttagtctcactcccttctttggagatacttaatctatcacagaactgcataggagacgag
ggtgtgaagaaattagcagacacactgaaggacctgcctaatctgcactgtttaagtctc
tacagcaacatgatttctgatgaaggggcagagagtttagcagctgttctcccacacatg
gcttccctcactgaccttgatgtaaagtttaacaaactaacagatgtcggcgcacaaagc
ttaggagccagcctaagaaactgtacaaaaattaagactttaaggatgtggaaccagtgc
atccctttcggtgtgcttgagagactcattcagcaggacagccgcatcctattgcactaa
DBGET
integrated database retrieval system
