Oreochromis niloticus (Nile tilapia): 102082389
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Entry
102082389 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl02010
ABC transporters
onl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102082389
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102082389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
102082389
Transporters [BR:
onl02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102082389
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
Motif
Other DBs
NCBI-GeneID:
102082389
NCBI-ProteinID:
XP_019206626
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All DBs
Position
LG22:complement(38318320..38350935)
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AA seq
1187 aa
AA seq
DB search
MEGRLTVEEHVWFYGCMKGLSEAEVKAELDTLLEDVGLLHKRHEQTKNLSGGMQRKLSVA
IAFVGGSKVVVLDEPTAGVDPYSRRGIWDLLLKYCKDQTIILSTHYMDEAELLGDRIAII
SQGKLCCCGSPLFLKSQLGSGYYLTVVKREGLDTSTPSNFSISTSASSNKLPPLIKDSDS
SLSEDTGLGSEDSSSYLAALLSLVQHHIPGARLVQESRREAVINLXQTAAKDSSLAILLI
TLDQRLTELGISSYGLSDSTLEEIFLRVAEETGVDTEAEVQPESPHSQPPSGQGTDGHPL
DEAETGRKKPHRKAEPQETDLLNGDGHGGVPATGWWLTWQQLRALFIKRWLYARRSRRGI
FAQIVLPDVFVLIALLFSLIVPPFGKRPAXLHPWMYGEQYTFFSNDDPGNPAMENLLEAL
LDQPGFGTKCMEKEDNMTDPQCEAGRGGLFMRPQLSYSAWDMFSRGNWSRDRPSPECQCS
TEDVYRMLPECPEGAGGLPPPQIKRPTGDILQNLTSYNISDYLVKTYSQILKKSLKTKKW
VNEFRYGGFSLGGRAVSXTQYLQDSVMAIRTRFRVPQNSSLGNLLHRLPEVLGGLNSENN
VKVWYNNKGWHALVSFVNVMNNGLLRASLPPGPERRKHGVTAYNHPLNLTKEQLTEVAMM
TTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQFVSGVKPILYXLANFTWDMLN
YTIPAIMVVLIFISFQQQSYVSETNLPALILLLLFYGWSITPLMYPASFVFTVPSTAYAF
LTSNLFIGINGSIATFVLELFVDEYLNEVNRILEVFLIFPHFCLGRGLIDMAKNQAMVDA
FKRLGTKPSLDPLQWDFVGKNLFAMVVEGVVFFIFTILLQYKFFIRYRPWWTKPELPPLG
PEDEDVAREGQXSGKAHSDILTMIDLSKVYKAGRKPAVDRLCLGIPRSECFGLLGVNGAG
KTSTFRMLTGDTPVTHGEAFLSQHSVLTEMEQVHQLMGYCPQFDAISDLLTGREHLELYA
RLWGVPEEFVSKVAQWGVKKLGLTQYADQETGGYSGGNERKLSTAISLIGSPPVIFLDEP
TTGMDPXRFLWNCILSVTKEGRAVVLTSHSMEECKGLCTRMAIMVSGRFRCLGSVQHLKN
RFGDGYTIILRLADTKSDPDSCPVSAYMKECFAIPDLPNPTLKLGHN
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaggctgacggtagaggagcatgtgtggttttatggctgtatgaagggtctg
tctgaagcagaggtgaaggcggagctggacactttgctggaggatgtgggcctcctgcac
aagcgacacgaacagaccaaaaacctttcaggtggcatgcagaggaagctgtctgtggcg
atagcgtttgtcggaggctcaaaggtggtcgtcctggatgaacctacagctggggttgac
ccgtactcccgcagagggatctgggacctgctgctcaaatactgcaaagaccagaccatc
atcctgtccacccactacatggacgaggcagagttgttaggtgaccggattgccatcatc
tctcaggggaagctgtgctgctgtggctcaccgctcttccttaaatctcagctggggtct
ggctactacctcactgtggtgaagagggaaggactggacaccagcactcccagtaatttc
agtatttccaccagtgccagctccaacaagctccctcctctcatcaaggacagcgactca
tcactgagtgaagacaccgggctgggaagtgaggatagcagctcatatttggcagctttg
ctgtcgctggttcaacaccacatccctggtgccagactggtgcaggagtctagacgtgag
gcggtgatcaacctgngccagacggccgccaaagacagcagcctggccatcctactgatc
acactggaccagagactgactgaactgggaatcagcagctacgggctgtcggacagcacg
ctggaggagatctttctgcgggtggcagaggagacaggtgtggacactgaagcagaggtg
cagcctgaatcaccccacagccagccgccgtcaggacagggaactgatggccatcctcta
gatgaagcagaaacaggaaggaaaaagcctcatagaaaagcagaacctcaggagacagac
ctgctgaatggcgatggccacggtggggtgcctgcaaccggctggtggctgacgtggcag
cagctgagagcgctcttcatcaaacgctggctttacgctcggaggagccgtcggggaatc
tttgcccagatcgttctccctgatgtatttgtgctgatcgccctgctcttcagccttatt
gttcctccttttgggaagcgccctgcanngttgcatccctggatgtacggcgagcagtac
accttcttcagcaacgatgatcctggaaacccagccatggagaatctgcttgaagctctc
cttgaccagcctggatttggtaccaagtgcatggaaaaggaggacaacatgacggatcct
cagtgtgaagctgggcggggtggtttattcatgaggccacagttatcttactctgcctgg
gacatgttcagcagaggcaactggagcagagacagaccctcacctgaatgtcagtgcagc
acagaagacgtctaccgaatgctccccgagtgtcctgagggtgctggagggcttccgcct
ccacagattaaaaggccgactggagacatcctgcaaaatctgacaagttataacatctca
gattacctggtgaagacctactctcaaatccttaagaaaagcctaaaaaccaagaagtgg
gtgaatgaattcagatatggtggcttctccctcggaggcagagctgtatcttaaacccaa
tatctccaagactcggtcatggccatcaggactcgtttccgagtcccacagaacagttca
ctgggaaacctgctgcacagactcccagaggtcttaggagggctgaacagtgaaaacaat
gtgaaggtgtggtacaacaacaaaggctggcacgccttggtgtcatttgtcaatgtgatg
aacaacggcctgctgagagcgagtctgccaccaggtcctgagaggaggaagcacggcgtc
actgcctacaatcacccactcaacctcaccaaggagcagctcaccgaagtagccatgatg
actacatcggtggatgtcctggtttccatctgtgtgatctttgccatgtccttcgtgccg
gccagtttcgtcctttttctgatcgaggagcgagtcagcaaagctaaacacctgcagttt
gtcagcggggtcaaaccaattctctactgactggccaattttacctgggacatgttaaac
tacaccattcctgctatcatggtggtgctgattttcatcagtttccagcagcagtcatac
gtttctgagaccaacctgcccgctcttatcctgctcctcctgttctacgggtggtccata
acccctcttatgtacccagcatcctttgtgttcactgtcccaagcacagcttatgcattt
ttgacctccaacctcttcattggaatcaacggcagcattgccaccttcgtcctggagctg
tttgtagatgagtatctgaacgaggtgaacagaatcctggaggtgtttttaatcttccct
catttctgtttgggacgaggacttatcgacatggccaaaaaccaggccatggtggatgcc
ttcaaaagactgggtaccaaaccaagcctggacccccttcagtgggactttgtaggaaag
aacctttttgcaatggtagtagaaggtgtcgtcttcttcatctttaccatactccttcag
tacaaattcttcatccgctacaggccttggtggactaagcctgagttgcctcctcttggt
ccagaggatgaggatgttgcgagagagggtcaannaagtggaaaagcacactcagacatc
ctcaccatgatcgacctgagcaaggtttataaagccggcagaaagccagccgtagaccgt
ctttgcctcgggattcctcgcagcgagtgttttgggctgcttggggtcaacggagctggg
aagacttcaacatttcggatgctgactggagatacacctgtcactcatggagaggctttc
ctcagccagcacagtgtgctgacagaaatggagcaggtccaccagctgatgggttactgc
ccacagttcgatgccatcagcgacctgctcacaggtcgggaacatctggagctgtacgcc
cgcctgtggggggtgccagaggagttcgtctctaaggtggcgcagtggggtgtgaagaag
ctggggcttactcagtatgcagatcaggagactggaggctacagcgggggcaacgagagg
aaactctccacagctatctccctcatcgggtctccacctgttatattcctggatgagccc
accactggcatggacccanaaagatttttgtggaactgcatcctcagtgtcaccaaagag
ggaagagctgtagtgctaacctcacacagcatggaggagtgcaagggactttgcaccagg
atggccatcatggtcagcggcaggtttcggtgtcttgggtctgtgcagcacctgaagaac
aggtttggtgatggatacaccatcatccttcgtttggcagacaccaaatcggaccctgac
tcgtgtcccgtcagcgcctacatgaaggagtgttttgcgatacccgatctgccaaatccc
actttaaagcttggtcataattaa
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