Oreochromis niloticus (Nile tilapia): 102082399
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Entry
102082399 CDS
T06104
Symbol
zbed1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
102082399 (zbed1)
04121 Ubiquitin system [BR:
onl04121
]
102082399 (zbed1)
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
102082399 (zbed1)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
102082399 (zbed1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DUF659
HSNSD_N
Motif
Other DBs
NCBI-GeneID:
102082399
NCBI-ProteinID:
XP_005463724
LinkDB
All DBs
Position
LG23:complement(2920806..2932166)
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AA seq
687 aa
AA seq
DB search
MDFLPKEPMEGKSSGPSCSGLNLVAHPRAKSKVWKYFGFDTDADGCILHWKRIYCRVCMS
QIAYSGNTSNLSYHLEKNHPIEFSEFVKSNTDQMREAFATAFSRIKTEPTVSQQQSQESY
LRQSLDSENKRHNDLTVAIINFICEGLYPVCTVEEPMFKNLIGIVDPGYSPPSKSDLAGK
MVPQMYCRTQNVVFSELSGVMNCGIATDLWQSPTQNRTYISLSVHSINYNSATGFSVTNK
CLKTFEVQEDNRAENITRAMYEAFVKWGITHKVIGATTDGSVDVVKACSLLDLSVEMPCL
GHTINHAMAEAFQLPRVSGFLGCCRKLIDHYRESAMYTAREKQKQHGLAQCTLITDQDRS
WFGTLAMLQRLKEQQAAISMTLIESSSSHHFTFSGSDWALLEGLIEVLQPFKVVANMIIS
CKYPTISMVRPVLHMLLNTTLKIKEGDLKEISMSKEVISKVLSSTYSQNSQLSQEIATFL
NIATFLDPRYKKLPFLSTQERSKVESIIIEEAKAILEKQISERSCLDDFSLVSDEPPCKK
QGLPGESSASTSVQDNPLAAIFCQSDADQSQEELHAQVVEELSNYKSQRVLGLNEDPLLW
WSNHAPLFPTLPKVLQKYWCVPATSVPCHRLFSSSGTFLSGKRNRIPSALVDMQVFLYEN
SRSYYEPEPCEDEFETVLETNSSLAQH
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggactttttacctaaggagccaatggagggtaaaagttcaggaccttcgtgctcaggc
ctcaatctggtcgcacacccacgtgccaaaagcaaagtgtggaagtactttggctttgac
acagatgcagatggctgcatattacattggaaaaggatttactgtcgtgtatgtatgagc
caaattgcctactctggaaacacctcaaacttgtcataccaccttgaaaagaaccatccc
atagagttcagtgagtttgtgaaaagcaacacagatcagatgcgtgaagcttttgctacg
gcgttttctaggataaagactgagccgacagtttcacagcagcagtcccaggaaagctat
ttaaggcagagcttagactctgaaaacaaacgacacaatgacttgactgtagctattatc
aacttcatttgtgaggggttatatccggtatgtacagttgaagagcctatgttcaagaat
ttaatcggtattgttgaccctggatattctcctccaagcaaaagtgacctcgcaggcaaa
atggttcctcaaatgtactgccgtacccaaaatgtggtctttagtgagcttagtggagtt
atgaattgtggcattgctacagatctgtggcaaagcccaacacaaaacagaacatatatt
tcactttctgtgcattcaatcaattacaacagtgcaactggcttctcagtgaccaacaaa
tgccttaaaacttttgaagtacaagaggacaacagagctgagaatatcaccagagccatg
tatgaagcctttgtgaagtgggggataactcataaagtcattggggctaccacagatggt
tcggtggatgtggtgaaagcatgctccctccttgatctgtcagtagaaatgccctgcctt
gggcacacaatcaatcatgcaatggctgaagccttccagctgccacgagtgagtggcttt
ttgggatgctgccgcaagcttatcgatcattatagagaatctgcaatgtatacagcacga
gaaaaacagaagcaacacggccttgctcagtgtacactcatcacagaccaggacaggtca
tggttcggtacactggcaatgctacaaagactgaaagagcaacaggctgctataagtatg
acgcttatagagagttctagtagccatcatttcaccttcagtggttctgactgggccttg
ttggagggcttgattgaagtcctccagccctttaaagttgtggcaaacatgatcatttct
tgtaagtatccaaccattagcatggtgagacctgtccttcatatgctgctgaacaccacc
ctcaaaattaaggaaggggatctcaaagagatcagcatgagcaaagaggtcatctccaag
gtcttgtcaagcacatattcacagaattcacagttatcccaagagatcgcaacattcctc
aacattgctacatttttggatcctcgttataagaaactgccttttctttccacccaagaa
cgttcaaaagttgagagtattattattgaagaggccaaagcaatccttgagaagcagatt
tcagagcgatcatgccttgatgatttttctttggtgtctgatgagccaccttgcaaaaaa
cagggacttccgggtgaatcttctgccagcacttcagttcaagacaaccctttggctgcc
atattttgccagtcagatgcagaccagagccaagaggagctacatgctcaagtagtagag
gagctgagcaactacaagtcacagagggttctaggtctgaatgaagaccctttgctttgg
tggtcaaaccatgcacctttgttccccacacttcctaaggtgctccagaagtattggtgt
gttcctgccacaagtgtcccttgtcataggttgttcagctcatcaggtacttttctttct
ggaaaaaggaaccgcataccttcagctctagtggatatgcaggttttcctgtatgagaac
tctcggagctactacgagcctgaaccctgtgaggatgaatttgaaactgttttggaaacc
aactctagtttggctcagcactaa
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