Oreochromis niloticus (Nile tilapia): 102082542
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Entry
102082542 CDS
T06104
Symbol
topors
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
102082542 (topors)
03036 Chromosome and associated proteins [BR:
onl03036
]
102082542 (topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
onl03037
]
102082542 (topors)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102082542 (topors)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102082542 (topors)
UBL E3 ligases
102082542 (topors)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102082542 (topors)
Cilium and associated proteins [BR:
onl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102082542 (topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
zf-RING_5
PWI
Motif
Other DBs
NCBI-GeneID:
102082542
NCBI-ProteinID:
XP_005457061
LinkDB
All DBs
Position
LG6:complement(18740662..18745715)
Genome browser
AA seq
802 aa
AA seq
DB search
MSAVKLALQLSQKNGRKRSSETKSAEVSPDSKCPICLDTFNNISRLDRCLHRFCFRCILE
WSKNKAECPLCKQQFNSIYHSIKSEQDFKTYDLQPVDNGSFGYFQGVRFRYRTTLTAAHR
QMRGRMSLAPDIGIISEGPTNSSQQRPDRYMRRMMMRLAAQRRAAREGGAVASVREQEMI
NFRRELYRQGVRVRNVQDGGRSRDTSAEFYRRNPACLHRLIPWLKRELNVLYGTHGSLGN
MVQHIIMSHITRYNMEDGAIQEELRHYLHSHTEHFMHEFISFAKSPFNMEAYDQHAVYDC
PAPSSNEDSSSNSSVIAISEDEDNSTGLNHPEDSTSALSLSLWDDETPGPSYSTTAEQSR
TERLSVLDSDSDSSLEEETQEFGISPEQMSPHNQTDLTQGKRNNEECVSSDSDDCVIVGF
VKPTVDRTPEVVQLSSDSEWSVDDDTHEVPLQPQHIRFTSCSPATLHSSDRSGAGLSENV
DTDDRHHSSSKERSSKTYKKSDRKGQGRRFDSKERSKERHKSKDRHYRRKRRSRSKERRH
SSRSPVISHSSVSTYSTEKSYSYSNGRDYPKCDRYKRDSDYTYQSYSHYSQERNDSGLHY
TQRHSYYYSSRRCSVFRSRSSSRGKDLRRRDRRRSRSRTYSSSRSPSARRKSHHDKPGGK
RKYKRRHLEDPSSTTAFNSYADGDSSALRKHKKKSKEKHRKKSKEKSRKTSRSLSVELLN
EEKAHERGRHHHKKKKKHKKKSKRHKSSERTEKRSPTIITIDSDSDSFANDSITQATNAN
NDKPADDRTDDTVDTTPADALL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagtcaagctcgccctgcaactgagccaaaagaatggcagaaaaaggtcctcc
gaaacaaaatctgcagaggtgtcacccgactccaagtgccccatctgcttggacacgttc
aacaacatttcccgccttgaccgctgcctgcacagattctgcttccgctgcattctcgag
tggtccaagaacaaagcagagtgtccgctgtgtaaacagcagtttaattcaatttaccac
agtataaaatcagagcaagacttcaagacgtatgacctgcagccagtggacaatggctct
tttggttattttcagggagtgcggtttagataccgcacaactctcaccgcagcccatcga
cagatgagaggaagaatgtctctggctcctgacattggtataatatctgaaggcccaaca
aattcttcccaacagcggccagaccgctacatgcggcgcatgatgatgaggctggcagcc
caaaggagagctgcaagggaaggcggggcggtggccagtgtccgagagcaagaaatgatc
aactttagacgggagctatatcgacagggggtgagggttcgaaatgttcaggatggtggc
cgctcccgagacacctcagctgagttttaccgaagaaatccagcctgccttcacagactg
atcccctggttgaaaagagagctgaatgtgctatatggaacccatggctctttgggcaac
atggttcaacacattatcatgtcacacattacacgttataacatggaagatggagctatt
caggaagagctcaggcactacctccacagtcacacagagcattttatgcacgagttcatt
agcttcgcaaagtcccccttcaacatggaggcatatgatcagcacgctgtctacgactgt
ccggcgccttcctcaaatgaagacagcagctccaactcatcagtaatcgctatctcagag
gatgaagacaactctacagggttaaaccacccagaagactccacatccgctttgagcctc
tcgttgtgggatgatgagacacctgggccatcgtattctacaacagcagagcagagcagg
acagagcgtctgtcagtcttggactcagactctgacagtagtttggaagaagagacacaa
gagtttgggatttccccagagcaaatgagtcctcataaccaaacagacctgactcagggc
aaacgcaataatgaagagtgtgtatcttctgacagtgatgactgtgttatcgtgggtttt
gttaaaccaacagtagatcggactcctgaggtggttcagctttcctctgactctgagtgg
tctgtcgatgacgatactcatgaagtgcctcttcagcctcaacacattcgcttcaccagt
tgcagtcctgcaactttacatagcagtgatcgcagtggggctggactatcagaaaatgta
gacacagatgatcgtcaccactcaagttcaaaagaaaggtcaagcaagacgtataagaag
tcagacagaaaaggtcagggtagaagatttgacagcaaagagagatctaaggagaggcac
aaatcaaaggacagacactataggaggaagaggaggtcaagaagtaaagagcggaggcac
tctagcagaagcccggtgatctcccacagcagtgtcagcacttattccactgaaaaaagt
tattcttactccaatggcagagactaccccaagtgtgacagatataaaagggacagtgat
tacacctaccagtcatatagccattacagccaagagagaaatgatagcgggctccattac
acacagaggcactcgtactattacagcagccgcagatgctcagttttccgctcccgctcc
agtagccgcggcaaggacttgcggagacgggacaggaggcgctctcgatccaggacttat
tccagcagccgctccccttctgccagaaggaaatctcatcatgacaagcctggtgggaag
aggaagtacaaaagaagacatttagaggacccctccagtaccacagcatttaactcctat
gcagatggtgactcctctgcattaagaaaacacaagaaaaaaagcaaagagaagcaccgt
aaaaaatccaaagagaagtctagaaagaccagcaggagtctcagtgtggagctcctcaat
gaggaaaaggcacatgagcggggcaggcatcaccataaaaagaaaaagaaacacaagaag
aaaagcaaaaggcacaagagtagcgaacgcacagagaagcgttcacccactatcattacc
attgatagtgacagcgattcttttgctaatgacagtatcactcaggccactaatgctaat
aatgataagcccgcagacgataggacagatgacacagtagacactacccctgcagatgca
ctgttgtaa
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