Oreochromis niloticus (Nile tilapia): 102083127
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Entry
102083127 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: desmoglein-2
KO
K07597
desmoglein 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102083127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
onl04515
]
102083127
Cell adhesion molecules [BR:
onl04515
]
Cadherins
Major cadherins
102083127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
102083127
NCBI-ProteinID:
XP_019202460
Ensembl:
ENSONIG00000007624
LinkDB
All DBs
Position
LG17:23460879..23477825
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AA seq
1153 aa
AA seq
DB search
MIRISWPVFVLLLFVVQAVVTKAKSGDSLIRRKRNWLPPPVKLEENVDHTQKTSVARIHS
DFDDGKGNLKYSLIGRGANQDPFHVFVVHERTGFIRVTQLLDREFINMYNLSGVARYNDG
TLAEENIDVRFKVVDQNDNPPVFQDVYTGRVDELTPRGTFVMKVAATDADEPDNPNSQVF
HTIIDQKPPHDMFYMNSDGSIFIKNSPDREKCDQYILTVKGQDLNGAPGGNTGTGTVTIA
VGDVNDNLPTLEKEQYEGSIEENTQGVEVMRIKAQDLDLQGTDNWEAVFDIVKGNEAGYF
SIKTDPNTNEGILMLDKAVDYEDVKNIELGLSVRNKAQPYGSGTSAGINIGGGGGGGGGG
GGGEEEEEAEGEEAEEEQEEEQGEQLELLGVLVGHRLKPILSINVKNQPEGAKFDPKVKA
IHVSEGSTSFNINDVIASYPAIDGDTGKPAQNVRYIKGSDPNNWLTIDPETAEIKLNKMP
DRESPHLVNGTYFAKILCISEDTPDKTATGTIAIQVADSNDHCPILTSDMETMCTTVDAV
IVNANDEDAFPNGPPFVFEILPEGTKGKWQVEHLNDTAAILRSQETLWPGIYEVEFLVKD
QQGHACQDPQKVKVEVCTCEDGIMCGKKGANGQPSKGAKLGPAGIGLLLLGLLLLLLIPL
LLLFCKCGGAATFPDLFTEMPFDTKSHLINYHTERQGENTDVPLLNLPTQLDGDVLNVAM
AQKPVAMDAVGSFDFAQSVGSINRLNGANYQGSYRKEIWGMNQPDPGGFYSETETRESLG
GLGLYDGMALPDHFLGQYYNQKIADGNDNLGVKDGLLVYDYEGQGSSAGSVGCCSLLESD
SDLQFLDNLGPKFKTLAEVCRGEKISYDDKQVPPPVSNVYNNPPTSVSSSVTVQKLSPPP
KLEPAMPKVEQSMVMKTTEHSEMAKESTTSVREGMNTMKRGLANQGQMVLIQQQQPVYYT
TTPVLQPMHYVVQPQVQNTMILAEAPTTNLQGLILVNNPQSGPAQGVFVQGNTLLSSGQA
QEPTMVLVDNSGAQRSHANLIQATNLSGSQTMKVVEGKVPAGSMKVRKGNQASYVEGGPL
QPGDLPGSQKILMVRENVVQDANGLQKKAEVFGSERILYKDSQSTGSMTSKFGSSTATVS
AGPVSHKVQEKFT
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgattcggatttcttggcccgtgtttgtgttgctactttttgtggtccaggctgttgtg
acgaaagccaaatctggagacagtctaataaggagaaaaagaaactggcttcccccacca
gtgaagttggaggaaaatgtggaccacacacaaaagacttctgttgccaggattcattca
gatttcgatgatggtaaaggaaatctcaaatactccctgataggccgtggtgcaaaccaa
gatcccttccatgtgtttgtagttcacgaaagaactggatttattcgtgtgacccaatta
cttgacagagagttcatcaatatgtacaatctttctggtgttgctaggtacaatgatggc
actctggcagaggaaaacatagacgtacgattcaaggttgttgatcagaatgacaatcct
ccagtgtttcaagatgtctatactgggcgtgtggatgagcttacaccgcgagggactttt
gttatgaaagtcgcagcaacggatgctgatgaaccagacaatcccaattcccaggttttt
cataccatcatagaccagaaaccacctcatgacatgttttacatgaacagtgacgggtcc
atcttcatcaaaaacagtccagacagagagaaatgtgatcagtatattctgacagtaaaa
ggtcaggacctaaatggtgcaccaggggggaacactggaactggcactgttactatagct
gttggtgatgtgaatgacaacctaccaactctggaaaaagagcagtatgaaggaagcatt
gaggagaacacacaaggtgtggaggtgatgagaatcaaagcacaggacctggacctgcaa
ggcactgacaactgggaagctgtatttgatattgtcaagggcaacgaggctgggtatttt
agcattaaaacagatcccaacaccaatgagggaatcctaatgcttgataaggctgtggat
tatgaagatgtaaaaaacattgaacttggactatctgtgaggaacaaggctcagccatat
ggatctgggacaagtgctggaataaatattggaggagggggaggaggaggaggaggagga
ggaggaggggaggaggaggaggaggcggagggggaggaggcggaggaggagcaggaggag
gagcagggggagcaactggagctgctgggagttctggtgggacatcgtttaaaacctatc
ctatcaatcaatgtgaagaaccagcctgagggggcaaagtttgatcccaaagttaaagcc
attcatgtctcagagggaagcacctccttcaacattaatgatgttattgccagctaccct
gcaatagatggagacactggaaaacccgctcaaaatgtcaggtatattaagggatcagac
cctaacaactggctaactattgacccagagacagctgagatcaaactgaacaagatgcct
gacagggaatctccacacttggtcaatggaacatattttgccaaaatactctgcatttca
gaagacacgcctgataaaacagccactggcaccatagccatccaagtggcggattctaat
gaccactgccccatcttgacaagtgacatggagactatgtgcacaacagtggatgctgtt
attgtgaacgctaatgatgaggatgcatttcccaatggacctccttttgtgtttgagatc
ctcccagaaggcactaagggaaaatggcaagtggagcatctcaatgacactgcagctatc
ttgcggtctcaggagactctttggcctggtatttatgaggtggaatttttggtgaaggat
cagcaggggcacgcgtgtcaagatccacagaaagtcaaggttgaagtttgcacctgtgag
gatggaatcatgtgtggaaaaaaaggcgccaatggtcagccaagcaaaggagcgaagttg
ggacctgcaggcattgggctgttactcctgggcctattactcttgttgttgattcctttg
ttgctactcttctgcaaatgtggaggtgctgcaaccttcccagacctctttactgagatg
ccttttgatacaaagtcacatctcatcaactaccatactgaacgtcagggagagaacacg
gacgtgccactactgaacttgccaacacaactggatggagatgtcctaaatgtagcaatg
gctcaaaaacctgtagcaatggatgcggtgggcagttttgatttcgcacaatctgtcgga
tccattaataggctgaacggggctaactaccaaggtagttacagaaaagaaatttggggc
atgaaccaaccggatccaggtggtttctactctgagactgagacaagagaatcgttggga
ggtttaggactttatgatggaatggctctgccagaccactttttggggcaatattacaat
cagaaaatcgctgatggaaacgacaaccttggcgtgaaagacggtttgttggtgtatgac
tatgagggccaagggtcctctgctggctcagtaggctgctgtagccttttggagtcagac
agtgatcttcagtttcttgataaccttggaccaaagttcaagactctcgcggaggtgtgc
agaggcgagaaaatttcttatgatgacaaacaagtgccacctcctgtgtctaatgtctat
aacaatcccccaacctcagtgtcaagttcggtgactgtacaaaaactgtcccctccaccc
aaactggagccagccatgcccaaagtggagcagagtatggtcatgaagacaactgagcat
tctgaaatggcaaaggaaagtacaacttcagtgagggaagggatgaatacaatgaaaaga
gggttggcaaatcaaggccagatggtcctaatacagcaacagcagcctgtctactacaca
accactcctgtgttgcagccaatgcattatgtagtccaaccacaggttcagaacactatg
atcctggctgaagcaccaaccaccaaccttcaaggcctgatactggttaacaacccacaa
tctggacctgcccaaggagtatttgttcagggaaacactctcctgtccagtggacaagcc
caggagcccaccatggtgctggtcgataacagtggtgcccagcggagtcatgcaaacttg
atccaagctacaaacttgtctggctctcagaccatgaaggttgtcgagggtaaggtccct
gcagggtcaatgaaagtgcgaaaggggaaccaggcttcctatgttgagggaggtcctcta
caaccaggagaccttcctggatctcaaaaaatcctaatggtcagagagaacgttgttcaa
gacgcaaatggtctgcaaaagaaggctgaggtctttggctctgaaagaattctctacaag
gacagccaatccactggctctatgaccagtaagtttgggtcctctactgctacagtatcc
gctggccctgtatcccacaaagtacaggagaaattcacttaa
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