KEGG   Oreochromis niloticus (Nile tilapia): 102083282
Entry
102083282         CDS       T06104                                 
Name
(RefSeq) CMT1A duplicated region transcript 1 protein isoform X1
  KO
K10266  F-box and WD-40 domain protein 10
Organism
onl  Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:onl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:onl04121]
    102083282
Ubiquitin system [BR:onl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     102083282
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_HPS5 F-box-like Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_IFT122_1st F-box Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 102083282
NCBI-ProteinID: XP_005458269
Ensembl: ENSONIG00000007971
LinkDB
Position
LG8:7611642..7617098
AA seq 861 aa
MFVFVVMFKEEKKMLPGADVVNVKETTESVDIKSVNASAEEVSTKTAEGCVSMCGMCPTC
VFASKPPGSSRCLWKVSDEFKRRFVLTLLLRCRSVQVLESIQGVLRGATSWTLHTYARSR
SPITPQEHPFRSSHQGHDGKPLGVNVKEIWKWFSSSPDWVKSSYVCRIFSLCDSELLRMV
ANLTNVLLVRQKSGFLEFNVSNHNNNHDNQEESEDPALMVVPGSSKSVSGVSRHRDFISC
LPVDLSKRILGMLGDHTLIRCTAVCQYWELLAKETLEEMKFRRNFQGQIFSMIEGCSSVN
LVSPTYANIVEIPVPVKDDKEEDIYSTVHKLKPFKSAYANIRTTAVQMEERNVYCGAYFT
KVLLDNEDPYRVLDYRGGLLLATGSKDRLVRLFYVSSETEDVSVLKGHVGSIRAVLLCED
RDLLITASFDASIRCWNLKTDRCDMALYGHTGTVNCLDADADKLVSGAKDCAVKVWCLQT
GKPFNGFNFKHPSPVLCVKVSKTTIYSSCTRGLVKIWDMENAALLRTIDAHRSAVKCLFL
DDWHLLSGDCAGKVMVWSINHNVEKCLITFSHQKEVKSLTLVYLRVITGCVDGKIRIFNF
LTGDCLREITAETGTGRLLSLHFLDQSILVNTIYSVKLFQFAKVFWDYASSSRADHCDVM
PQDSLVSEKSAASLRKFPLSAPGGDHVAQLPSTTQKIHSYNCMKPERGERLYRTHILSSP
VKCQIQPRVCGEIAKQSVKLSENAATERIKKRGLHHPLTQDCIHLRVNTILRSQCTEEVS
INMESNARLRDLWGPHTAKASLHSSPKRSVHMCSLQETHDGHPSRAKTCVPVVKRTVTEH
MTNKPQGREVSTAPGNTRRTL
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgtttgtgttcgttgtgatgtttaaagaggaaaaaaaaatgttgcctggcgcggacgtg
gtgaatgtaaaggaaactactgaaagcgtcgacataaagtccgttaatgcctcggcagag
gaagtcagcaccaaaacagcggagggatgcgtcagtatgtgcggtatgtgtccgacctgc
gtctttgcctccaaacctccgggttccagtcggtgtctgtggaaggtgtcggatgagttc
aagaggaggttcgtgctgacgctccttttacgctgcaggagcgtccaagtcctcgagagc
atccaaggtgtgctgcgtggcgcgacgtcgtggacgctccacacctacgctaggtcaaga
agccccatcacacctcaggaacaccccttccgctcttcccaccaaggtcacgatggaaaa
cccctgggagtgaacgtgaaggaaatctggaagtggttcagcagcagtccggactgggtc
aagtcaagctacgtttgccgtattttttcactgtgtgactccgaacttttacggatggtc
gccaacttaaccaacgtgctcctggtcagacaaaaaagtggattcctggagtttaatgta
agtaaccacaataacaatcatgacaatcaggaggagtctgaggaccctgctctaatggta
gtgccgggatcctccaagtctgtgtctggggtcagccgacacagagacttcataagctgc
ctacctgttgatctctccaagaggatattaggaatgttaggtgaccatactttgattcgt
tgcacggcagtttgtcagtactgggagctccttgcgaaggaaaccttggaggaaatgaaa
ttcagaagaaattttcagggccaaattttttccatgatagaggggtgcagcagtgttaat
ttagtgagtcctacttatgccaacattgttgaaatccctgtaccagtaaaggatgacaag
gaagaagatatttattctactgtccacaagctcaagccatttaaatccgcttatgcaaac
atcagaaccacagcagtgcaaatggaagagcgaaatgtttactgcggtgcatattttacc
aaagtgcttctggacaacgaagatccttatcgggtgttggactatagaggaggactgctg
ctggccactggctcaaaggaccgtttggtgcgtctgttttatgtgtcatcagaaacagaa
gacgtgtcggtgctgaaaggacacgttggaagcattcgggccgtgctgctctgtgaggac
agagatctgctgataaccgcgagctttgacgcgagtatcaggtgttggaatttgaagaca
gaccggtgtgacatggcgctgtacggtcacactggcaccgtcaactgtctggatgctgat
gctgataaacttgtctcaggagctaaagactgtgcagttaaagtgtggtgtctgcagacc
gggaagccttttaatggttttaatttcaagcaccccagtcctgtcctgtgtgtaaaggtc
agcaaaactaccatctacagcagctgtacacggggccttgtcaaaatatgggacatggag
aatgcagcactgctccggacgattgatgcccacaggagcgcagtgaagtgcctgttcctt
gacgactggcaccttctatctggggactgcgctggcaaggtcatggtgtggagcatcaac
cataatgttgagaagtgtcttataaccttcagccaccaaaaggaggtaaaatctcttacg
ctggtctaccttcgtgttattactggctgtgtggatggaaagattcgcatatttaatttc
ctcactggtgattgtttgagagagatcacagcagagaccggaacaggtcgtctcctgtcc
ctgcacttccttgaccaaagtatattagtgaacacgatatacagcgtgaagcttttccag
tttgccaaagtgttctgggattatgccagttcctcacgggcagaccactgtgatgtgatg
ccacaggatagtttggtttctgagaaatctgcagcttctctcagaaagtttcctctttcc
gctcctgggggagatcacgtggcacagttgccttcaaccacccaaaagattcacagctat
aactgtatgaagccagagagaggtgagcggctttaccggacccacatcctgtcctccccc
gttaaatgccaaatacaacccagagtgtgcggcgagattgctaaacagtcagtgaagctt
agcgagaatgcggcaactgaacggataaagaagagaggccttcatcatcctctgacacag
gactgcatccacctccgggttaacactatcctgaggtctcagtgcacggaagaagtcagc
atcaacatggagagcaacgctagactgagagatttgtggggtcctcacacggctaaggct
tctctgcactcatctccaaaacggagcgtgcacatgtgttcactgcaggaaacgcatgat
ggtcatcccagcagggccaagacctgtgtcccagttgtgaaacgaactgtcactgaacat
atgacaaacaaaccacaaggcagagaggtttccactgcccctgggaacacaagaagaacc
ttatag

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