Oreochromis niloticus (Nile tilapia): 106096432
Help
Entry
106096432 CDS
T06104
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
106096432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
onl02000
]
106096432
Transporters [BR:
onl02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
106096432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
106096432
NCBI-ProteinID:
XP_019222914
Ensembl:
ENSONIG00000005182
LinkDB
All DBs
Position
LG14:complement(16849022..16861038)
Genome browser
AA seq
579 aa
AA seq
DB search
MMKRKSTQRDTQPEVEERGHWGNKVEFLLAVAGNVVGLGNVWRFPYLCYKNGGGAFLVPY
LVFVVTCGVPVFLLETTIGQFTQEGGITCWRKLCPLAEGIGFGGQLILFYSCMTYIIILS
WALLYLVFSFSSQLPWASCNNYWNTEGCVDFSTQNNTVHWTNQTNSTSAATEFWERRVLM
ISGGIEEIGSIQWEVLLCLIAMWIVCYFCIWKGVRSTGKVVYVTATFPYVMLLILLIRGL
SLPGALEGVMFYLLPEPSRLMDPQVWMEAGSQIFFSYSIGVGSLIALGSYNKYNNNCYKD
SLMLCLLNSGTSVVAGFAVFSVLGFMAHEQGVPIAEVAESGPGLAFIAYPQAVAMMPLPQ
LWSICFFVMLILLGLDTQFVAMEVVMTSFIDMFPKVLRRAGRREIFLLLFCLICFFCQLV
MITEGGMFVFQLFDYYACNGACILFLCVFETLALGWIFGVDKLYDIIKDMTGTRANYFFK
LCWLYLTPLVSLGSFICSLIEYQPLTFNRGYVYPSWAYVMGWVLALSSILLVPGWALYKL
GTGTGTLSQRFHHLCQPNLENLENQKRETELETIRELLQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagaaaatctacgcagagagacacacagccagaggtggaggagcgaggacac
tggggaaataaggtcgaatttctccttgctgtggcaggaaatgttgtcggcctggggaac
gtgtggaggtttccctacctctgttacaaaaatggagggggtgcattcctggtgccatat
ctggtatttgtggtaacctgtggtgtacccgtgttcctgctggagacaactatagggcag
ttcacccaggagggtggcattacctgctggaggaagctttgcccactagcagaagggatt
ggctttggtggacagctaattctcttctatagctgtatgacctacatcattattctgtcc
tgggctttgctctacctcgtgttctccttcagctctcagcttccttgggcctcctgcaac
aactactggaacacagagggctgtgtagacttttcaacacaaaataacaccgtccactgg
accaaccagacaaactcgacctctgcagccaccgaattttgggaacgaagagtgctgatg
atctcagggggcattgaggaaataggcagcatccagtgggaggtgctgttgtgcctcatt
gctatgtggatcgtctgctacttttgtatctggaaaggagttagatctacaggaaaggtg
gtatatgtcacagctaccttcccctatgtgatgttgttaattctgctgattcgtggcctc
tctcttcccggagcattagaaggagtgatgttttatcttctgcctgaaccctcacgacta
atggaccctcaggtgtggatggaggctgggagtcagatcttcttctcctacagtatcggt
gtgggttccctaattgcgctgggaagctacaacaaatacaacaacaactgctataaagac
tctctgatgctgtgtttgctgaacagtggtaccagtgttgtagctggttttgctgtcttc
tcagtgctgggattcatggctcatgagcaaggcgttcccattgcagaagtggccgagtca
ggtccaggcctggcattcattgcataccctcaggctgtagccatgatgccccttcctcaa
ctgtggtccatctgtttctttgttatgctcattctcttgggtctggatacacaatttgtt
gccatggaggtggtgatgacgtccttcatcgatatgtttcccaaagtgttgcgcagggcc
ggtcgaagggagatttttctccttctcttctgcctaatctgcttcttctgtcagcttgtc
atgattactgagggagggatgtttgtgttccagttgtttgactactatgcttgtaatgga
gcctgcatcctcttcctatgtgtgtttgaaactctggcactgggttggatatttggggta
gataagttgtatgacataataaaggacatgacaggaacacgagccaactacttctttaaa
ctctgctggctctacctcacaccactggtctcactgggctcttttatatgttctttaatc
gagtaccagcctctgacctttaatcgggggtacgtctacccatcctgggcatatgtgatg
gggtgggtactggctctctcctccatcctgcttgttccaggatgggccctgtataaactg
ggcactgggactgggactctaagtcagcgtttccatcatctgtgccagcctaatcttgaa
aatttagagaaccaaaagagggaaactgagctagagaccatcagagaacttctgcagtag
DBGET
integrated database retrieval system
