Oreochromis niloticus (Nile tilapia): 106096974
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Entry
106096974 CDS
T06104
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 1 isoform X1
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
onl03016
]
106096974
Transfer RNA biogenesis [BR:
onl03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
106096974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_12
TPR_2
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_1
TPR_16
TPR_8
CFAP70_TPR_C
CNOT10_TPR
ARM_TT21_2nd
TPR_7
TPR_MalT
TPR_Slam
TPR_11
TPR_9
TPR_20
TPR_15
CFAP70_mid_TPR
RNPP_C
TPR-S
RMD1-3
RPN7
DUF4810
TPR_Psidin_N
HAT_Syf1_M
Coatomer_E
ChAPs
SNAP
Motif
Other DBs
NCBI-GeneID:
106096974
NCBI-ProteinID:
XP_019212505
LinkDB
All DBs
Position
LG3:complement(59975715..59988250)
Genome browser
AA seq
488 aa
AA seq
DB search
MSEDSSALLSRLQQLQCHFTWDLKIDVDLEKLSTRLHIDIDFHQSQCEGGSCSYSLLAYV
RYLQDQQEEALSLLNQSEKTIRESYGDESEKRLIVTYGDMAWLKYHDGDFAQSQSYCQRV
EDILVKYPTGSSGSLLPEVYGDQAWTYFKVSWSSLSKAIDCFCKALEVQRHDAEWNAGYA
IALFHREQWFLGNKQEGEESQATKQLRFALEINPNNAVLQCMLALKLMAYKKYEEADGLV
KKALENDPDNPHVIRHSGNYLHNRNRLDEAIDVIKRGLRRGDQLPSFTRQLALCYKKKKI
AEQCRGPFSNREEVRKWRRICISHLEDAVKMKPSLLRVWAELALLYAEEGDMSRAEETFK
HCLEKLPELKEKRDCLIIHQHYGDFHLYHTKNEAQAIAHYTKGLLIPLKKYEWRQCAKRL
KQIAERRRSRNPGDGEALALLGQVARAEGNNMEAALFYEEALNYDKDNAEYLSALCELRL
ELQGSSSD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagatagcagcgctctgctcagcaggctgcagcagttgcagtgtcacttcacc
tgggatctgaagatcgatgtggacctggaaaaactgagcactcgactacacattgacata
gatttccatcagagtcagtgtgagggagggagttgctcctacagcctcttggcttatgtc
aggtatcttcaggatcaacaagaggaagcgctgtcacttttaaaccaatcagagaagacc
atcagggagagttatggtgatgagagtgagaagcggctgattgtgacgtatggagacatg
gcctggctgaaataccatgatggagactttgcacagtcacaaagctactgtcagagagtc
gaggacatactggtgaagtatcccactggttcatcaggaagtctccttccagaggtgtat
ggcgatcaagcctggacctattttaaggtgtcatggtcttctctctccaaagccatagac
tgtttttgtaaagcacttgaggtacagcgtcatgacgcagagtggaacgccggctacgcc
atcgccctctttcacagagaacagtggtttttaggaaataaacaggaaggtgaggaatcc
caggccaccaaacagcttcgctttgcattggagatcaaccccaataacgctgttctgcag
tgcatgctggccttgaagctgatggcttataagaaatacgaagaggctgatggtttggtg
aagaaagcactagaaaatgatcccgataaccctcatgtcatccggcactccggaaattac
ttacataatcggaatcgactggatgaggctattgatgtgattaagcgaggcctgagaagg
ggcgatcaattaccttccttcacccgccagctggctctgtgctacaagaagaagaaaatt
gctgagcagtgccgcgggcccttcagcaacagagaagaggtgcgtaagtggaggcgtatt
tgtatcagtcaccttgaagatgctgtgaagatgaagccatccttgctccgggtgtgggct
gaactggcactgctgtatgcagaggaaggggatatgagcagggctgaggagactttcaag
cactgcttggagaagttaccagagttgaaggagaaaagagattgtctgattatccatcag
cactacggtgactttcatctttatcacacaaaaaatgaggctcaagccatcgctcactat
accaaggggctgctgataccactgaaaaaatatgagtggagacagtgtgctaagagactg
aagcagatcgctgagagacgtcggtcaaggaatccaggtgatggtgaggctctcgctctg
ctgggtcaggtggccagagctgagggcaacaacatggaagctgctttgttttatgaagaa
gctctgaactatgacaaggacaatgcagagtacctgtctgctctgtgtgagctgcgcctg
gagctgcagggatcatcctctgattaa
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