Oreochromis niloticus (Nile tilapia): 106097084
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Entry
106097084 CDS
T06104
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
106097084
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106097084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
YVC1_C
DUF1054
Motif
Other DBs
NCBI-GeneID:
106097084
NCBI-ProteinID:
XP_019216783
Ensembl:
ENSONIG00000003250
LinkDB
All DBs
Position
LG1:complement(37227995..37250918)
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AA seq
1446 aa
AA seq
DB search
MYIRVSFDSKPDSLLHLMVKDWQLELPTLLISVHGGLQNFDLPPKLKQVFGKGLIKAAVT
TGAWIFTGGVSTGVIRHVGDALKDHSSKSRGKVCAIGIAPWGIVENKEDLIGRDVTRPYQ
TMSNPLSKLSVLNSSHSHFILADNGTCGKYGAEVRLRRQLEKHISLQKINTRLGQGVPVV
CLIVEGGPNVISIALESLKEEPPVPVVVCDGSGRASDILSFAHRYCEEDGLVSESVKDQL
LVTIQKTFNYSRSQAQQIFLMVMECMKKRALITVFRMGSEGQQDIEMSILTALLKGTNAS
ASDQLSLALAWNRVDIARSQIFVYGLHWPPVRNSPSDRPKSPVAQRPSAGGAKGKPRGKK
GKGGKSKPEPPEETDPRKLELLNWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHHFLTI
PRLEELYNTKLGPANTLHFLVRDVKKGNLPPDYQITLIDIGLVLEFLMGGAYRCNYTRKS
FRTLYNNLYGLKRPKALKLLGMEDDEPRPKGKGKKNKKKEEEVDIDVDDPEVSRFQYPFH
ELMVWAVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHESSQSELVDDIYQDLENNS
KDFGQLAYELLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLL
TDMWMGCLRMGKSNSLKVILGIIFPPAILLLDFRLGDEAPHHSSKGSNDGKTKDDKKSNK
DAASNVDAISKKGDEEENESDKKHGKRVPIGRKIYEFYNAPFTKFWFNTISYLVYLMLYN
YIILVKMERWPSLQEWIVVSYIVTLGLEKFRQILMSEPGKLKQKINVWLEDYWNITDLVA
ISVFIFGFLLRLEPEPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDM
LYFVVIMLVVLMSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEI
NPPCGENLYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSIS
NQVWKFQRYQLIMTFHDRPILPPPLIVFPHIYIVLKRLCCHCRRRAEGGEYDDRERRLQL
VLNADELKSLHEFEEQCVEEYFREKDDEKQSSNNERIRVTSERVENMFMRLEEVNEREHS
MKASLQTVDLRLAQLEEFSNRMMNALEKLAGVDRAELVRTHSRGSSVCEPGTLLRQGSIN
SADGYSLYRYQLEHDDRTSVFGDMEGNDKRVQQSPERQAGNSEGRAKTGELKEFGSALEA
QGLKDTQSLSNVDILISPCDPDIKSPKTCSISTQRDSADTNKDKPIEKGRLEAAVSFPLE
RSKVTQYLSSPTLSSSPSSNKKYVSNIIYSTSQQDQNWATEMTSKESKEELDETKLQGHE
QEGQNNNAEEEEELLVGEDQMYPTLRSKSLNANPRKTRKKKKEEDEETPRTASSVKDLVS
AFSGGP
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcagggtctcctttgactccaaaccagattccctgctccacttgatggtgaag
gactggcagctggagcttcccacgctactcatctctgttcatggaggcctccagaacttt
gacctgcctcccaagctgaagcaggtctttggtaaagggctgatcaaagctgctgtcacc
actggagcctggatcttcactggaggagtcagtacaggagttatccgccatgttggcgat
gctctgaaagaccattcttcgaagtccagagggaaagtttgtgctattgggattgcacca
tgggggattgtggagaacaaagaagacctgattgggagagatgtgacccggccttatcag
acaatgtccaacccactcagcaagctgtcagtcctgaacagcagccactcccacttcatc
cttgccgataacgggacgtgtggaaagtacggcgctgaggttcgcctccgccggcagctg
gagaagcatatctctctgcagaaaatcaacacacgtcttggtcagggggtcccagtggtt
tgtctaatcgtagaaggtggtccaaatgtcatctcaatcgcactggagagcttgaaggag
gagccccctgtcccagtggtggtctgtgatggcagtggtcgagcttcagacatcctttcg
tttgctcacagatactgcgaggaagatgggttggttagtgagagtgtcaaagaccagctg
ctggtcaccatccagaagactttcaactacagccgcagccaggcacagcagatcttcctc
atggtgatggagtgcatgaagaagagagctctgattacagtgttcaggatgggctcagag
ggacagcaggacattgagatgtccatcctcacagctctgctcaaaggtacaaatgcttct
gcgtctgatcagctgagcttggctctggcctggaacagagtggacattgctcgcagtcag
atctttgtgtatggactccactggcctcctgtgcgaaattcaccttctgaccgtccaaag
agcccggtagcccagcgaccatcagcaggaggggctaaagggaaaccccgggggaagaag
ggaaaaggaggaaaaagcaaacccgaacctcctgaagagacggaccctcggaaactggag
ctgctcaactgggtgaactcattggaacaggccatgatggacgccctggtgttggacagg
gtcgactttgttaaacttctgattgagaacggcgtcaacatccaccacttcctcaccatc
ccccgtctggaggagctgtacaacacgaaactgggaccagccaacacacttcactttttg
gtccgagatgtcaaaaaggggaatcttcctccagattaccagatcacactgattgatatt
ggactggtactggagttcctgatgggtggagcataccgctgcaattacacaaggaagagt
ttcaggacactgtataacaacctgtatggcctcaaaagacccaaagcgctgaagctcctt
ggtatggaggatgatgaaccccgcccaaaggggaagggaaagaagaacaagaagaaggag
gaggaagtagacattgatgtagatgaccctgaagtcagcaggttccaataccccttccat
gaactgatggtgtgggcggtgttgatgaagcgccaaaagatggcattgttcctgtggcag
cgaggggaggaggccatggcaaaggctctagtagcctgcaagctctacaaggccatggct
cacgagtcttcccaaagcgagctggtggatgacatctaccaggacctggagaacaactcc
aaggactttggtcagctggcctatgagctgttggatcaatcctacaaacacgatgagcag
gtggccatgaagctcctgacctacgagctaaaaaactggagcaactccacctgtctgaaa
ctggctgtagctgccaaacacagagacttcattgcccacacctgcagccagatgctgctg
accgacatgtggatgggctgtctgaggatgggcaaaagcaacagcctcaaggtcatttta
gggattattttccctcctgccatcctgctcctggactttcgtcttggggatgaagctcct
catcattcgtccaaaggaagcaatgatggaaaaactaaagatgacaagaagtcaaacaag
gatgcagcatctaatgttgacgctatttcaaagaaaggagatgaagaagaaaatgagagt
gacaagaagcacgggaagagggttcctatcgggaggaaaatctatgagttctacaacgcc
ccattcaccaagttctggttcaatacgatctcatacctggtgtatctgatgttgtataac
tacataatcctggtgaagatggagcggtggccatctttgcaagagtggatcgtcgtctct
tacatcgtcactctgggcctggagaaattcagacagatcctgatgtctgagcctgggaag
ctgaagcagaagatcaacgtgtggttggaggactactggaacatcacagacctggtggct
atctcggtcttcatctttgggttcctgctgcggctggagcctgagccgtacatgggatac
ggccgtgtcatctactgcgtcgacatcatcttctggtacatccgagttcttgacatcttc
ggagtaaacaaatacctggggccctacgtcatgatgatcggcaaaatgatgatcgacatg
ttgtacttcgtggttatcatgctggtggtgctgatgagttttggtgtagctcggcaggcc
atcctccatccagatgaggagccgacgtggcgtttggcccgcaacatcttctacatgccc
tactggatgatctacggagaggtgtttgccgactccatagacctttacgcgatggaaatc
aatcctccatgtggagaaaacttatatgatgaagatgggaagaagcttcctccctgcatc
cctggagcctggctcacccccgccatcatggcttgttacctgttggtagccaacatcctt
ctggtcaacctgctcattgccgtcttcaacaacaccttttttgaggtgaagtccatctct
aaccaggtgtggaagttccagcgatatcagctgatcatgaccttccatgaccgccccatc
ttgcccccgccgctaatcgtcttcccccacatctacatcgtactgaagaggctgtgctgc
cactgcagacggagagcagagggtggagagtatgacgaccgtgaaagacgactgcagctg
gtgctgaatgcagatgagctgaagagtctgcatgagtttgaggaacagtgtgtggaggaa
tacttcagagagaaggacgatgagaagcagtcatctaacaacgagcgaatcagagtcacg
tctgaaagggtggagaacatgttcatgcgtctggaggaggtgaatgaaagggaacactcg
atgaaggcatccctgcagacggttgacctccgcctggctcagctggaggagttctccaac
cgaatgatgaacgctctggagaagctggcgggcgtcgaccgagccgagctcgtccgcacg
cactccagaggatcgtccgtgtgtgagccgggcactctgctgcgtcaaggcagcatcaac
agcgctgacgggtacagtctgtacagataccagctggagcacgacgacaggacgtcggtg
ttcggagacatggagggaaacgacaagagggtccagcagagtccagagaggcaagctggg
aacagcgagggaagagccaaaacaggtgaattgaaagagttcggatcagctctggaggct
caaggacttaaggacactcagtctctttcaaacgtggacatcctgatctctccctgtgac
ccggacatcaaatcccccaagacctgctccatttcaactcaacgtgactcggctgacact
aacaaagataaacccatagagaagggccgactggaggcggctgtgtccttccctctggag
aggtcaaaggtcacacagtatttatcctctccaaccctcagcagctctccatcttccaac
aagaagtatgtcagcaacatcatctatagcaccagccagcaggaccagaattgggccact
gagatgaccagcaaggaatccaaagaggaactagatgagaccaagctgcaaggccatgaa
caggagggtcagaataataatgcagaggaggaggaggagctgctggtaggggaggaccag
atgtatccaacgctgcgctccaagagtctcaatgccaacccaagaaagacgaggaagaag
aagaaggaggaggacgaggaaacaccacgtacagccagcagcgtcaaagatctggtttcg
gcgttcagtggggggccatga
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integrated database retrieval system
