Oreochromis niloticus (Nile tilapia): 109194284
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Entry
109194284 CDS
T06104
Name
(RefSeq) integrin beta-2
KO
K06464
integrin beta 2
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04145
Phagosome
onl04514
Cell adhesion molecule (CAM) interaction
onl04517
IgSF CAM signaling
onl04518
Integrin signaling
onl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109194284
04517 IgSF CAM signaling
109194284
04518 Integrin signaling
109194284
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109194284
09142 Cell motility
04810 Regulation of actin cytoskeleton
109194284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
onl04131
]
109194284
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onl04147
]
109194284
04515 Cell adhesion molecules [BR:
onl04515
]
109194284
04090 CD molecules [BR:
onl04090
]
109194284
Membrane trafficking [BR:
onl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109194284
Exosome [BR:
onl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109194284
Cell adhesion molecules [BR:
onl04515
]
Integrins
Integrin beta subunits
109194284
CD molecules [BR:
onl04090
]
Proteins
109194284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
vWA_SIBA-E
EGF_2
I-EGF_1
EGF_Teneurin
DUF3881
Motif
Other DBs
NCBI-GeneID:
109194284
NCBI-ProteinID:
XP_019208876
Ensembl:
ENSONIG00000013816
LinkDB
All DBs
Position
LG16:complement(32966482..33007213)
Genome browser
AA seq
631 aa
AA seq
DB search
MDWCMPLLILLLMGRHGLCQQEEVCSKSLINSCDDCIKSGPYCAWCQALNFTKAGEQDAV
RCNTRANLISAGCQENEIISPANKLNIAKNDPLSASENGQVVQMRPQKIDLDLRPGLPVS
FNVSFKAAEGHPVDLYYLMDLSYSMRDDLANVKVLGTDLFAALRKITKHARIGFGAFVDK
TVLPYTNTNKEKLLKPCDENDQQCQAAFGYRHVLSLTPNKNDFEAEVKKQFISGNLDSPE
GSLDAMMQAAVCEDKIGWNSNSTRLIVLTTDAGFHMAGDGKLAGILEPNDEQCHMENNLY
VKSTEMDYPSVGQLATQLEKNRIQTIFAVTQNVESVYKELSKMIPKSEVGVLSSDSKNVV
ELIEGAYNALSSKVTITHDSLPENVRVVYRPICSHGEKSENQGVCDQVRVGDEVIFEITV
TADLCMENKFFTISPRGIKDTLTVTINTTCKCQCDTAGPIGDPHPHCNMRGSISCGICRC
NKGHVGQFCSCKIGDKDEHTLRASCQKDNGTKCEGRGDCVCGRCECHNTDSGSQYYGPYC
ECDDDHCEKYQNQQCGGNGECRCGKCECNPGFEGSTCQCKTSDEACRTVNNSVCNGRGSC
KCNQCECRGGYQRPHCLECPGCTDPCQTKVN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggattggtgtatgccattacttattctcctgctgatgggcagacatgggctgtgccaa
caagaggaagtttgctcaaagtcactgatcaactcctgtgatgactgtataaaatctggg
ccatactgtgcatggtgccaagcactgaatttcaccaaagcaggagaacaggatgcagtg
cgctgtaacaccagagctaacttgatcagtgcaggatgccaagagaatgaaatcatctcc
cctgcaaacaaactaaacattgccaagaatgatcctctgtctgcatctgaaaatgggcaa
gttgtccaaatgaggcctcagaagattgaccttgacctgcgacctggacttccagtttca
ttcaatgtttcttttaaggcagctgagggccatccagtggatctctactacctgatggat
ctctcctactccatgagagatgacctggcaaatgtcaaagtactaggaacagatctcttt
gctgcactgagaaaaatcacaaaacatgctagaatagggtttggtgcctttgttgataaa
acagtccttccttacacaaataccaacaaggaaaaactgctgaagccgtgtgatgagaac
gaccagcagtgtcaagctgcctttggctacagacacgttcttagcttgacaccaaataag
aatgacttcgaagctgaagtgaaaaagcagtttatctctgggaatctggactctccagag
gggagtctggatgccatgatgcaggctgctgtatgtgaggacaaaattggttggaacagc
aacagcactcggctgattgtgcttaccactgatgctggattccatatggctggggacgga
aagctggccggtatactggaacccaatgatgaacaatgtcacatggaaaacaatctttat
gtcaagagcactgagatggactacccctctgttggacagctagctacgcagctggaaaaa
aacaggattcagacgatatttgcagtgacacaaaatgttgagtctgtgtacaaggaactc
tctaagatgattccaaaatcagaagtaggagttctgtcatcagattccaagaatgttgtt
gagttgattgaaggagcctacaatgcattatcctctaaagtgaccataactcatgacagt
ctccctgaaaacgtgagagtcgtctacaggccgatatgcagccatggagaaaaaagcgag
aatcagggggtttgtgaccaagtgcgcgtgggagacgaggttatttttgaaattacggtg
accgcagacttgtgtatggagaacaagttctttaccatcagtccacggggcattaaagac
acgctgacagtgaccataaataccacatgtaagtgccaatgtgacactgctggacccatt
ggtgacccccatccacactgcaatatgcgtggaagcatcagctgtggtatttgtaggtgc
aacaaaggtcacgttggtcagttctgtagctgcaaaattggggacaaagacgagcacacc
ctgagagcatcctgtcagaaggataatggcactaagtgtgagggtcgaggagactgtgtg
tgtggccggtgcgagtgccacaacacagatagtggaagccaatactatggaccctactgt
gaatgtgatgatgaccactgtgagaagtatcagaaccaacaatgtggaggaaatggtgaa
tgcaggtgtggaaaatgtgaatgtaatcctggctttgaaggctctacctgtcagtgcaag
acctctgacgaggcctgccgtaccgtaaacaacagtgtttgcaacggcagagggtcctgc
aagtgcaatcagtgtgaatgtagaggaggataccagcgtcctcactgcctggaatgccct
ggctgcactgacccgtgccagaccaaagtgaactga
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