Oreochromis niloticus (Nile tilapia): 109194473
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Entry
109194473 CDS
T06104
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 1
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
onl03016
]
109194473
Transfer RNA biogenesis [BR:
onl03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
109194473
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_8
TPR_17
TPR_11
TPR_7
ANAPC3
TPR_15
TPR_20
Vps39_1
ARM_TT21_C
TPR_9
Motif
Other DBs
NCBI-GeneID:
109194473
NCBI-ProteinID:
XP_025761553
LinkDB
All DBs
Position
LG3:complement(59744528..59753934)
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AA seq
488 aa
AA seq
DB search
MSEDSSALLSRLQQLQCHFTWDLKLDVSPKRLITRTEIDIEFHQSPYKGAGCFYSLLAYC
RYLQDQHEEALKLLNQSEETIRESYGDESEKRLIVTYGDMAWLKYHDGDFAQSQSYCQKV
EDILVKYPTGSSGGLLPEVYGEQGWAYFKVSRSSISKAIDCFRKALEVQTHDVEWNTCYA
VVLFCGEQWVLENLQKHKKSQAIKQLRFALEINPNNAALQCMLGAKLGAYKKYEEAESLV
MKALENDPDNPHILRHSGKYLRNRNRLDEAIVVFERGLKRGDQLSSFNYQLALCYKQKII
AEECRRRFSNREEVRKWRRICISHLEESVKRKRPFVRAWAELALLCAEAGDMSRAEEAYQ
QCLKKLPEVEEEKDCQTIHQRCGDFHLYHTKNEAQAIAHYTKGLLIPLKKYEWRQCAKKL
KQIAERRLAKNRGDGEALALLGQVARAEGDSKKAAFFYEKALNYDKDNEEYLSALCELRL
ELQGSSSD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagatagcagcgctctgctcagcaggctgcagcagttgcagtgtcacttcacc
tgggatctgaagctggacgtgtccccaaaaagactgatcacccgaacggagattgacata
gagtttcatcagagtccgtataaaggagcaggttgcttctacagcctcttggcttattgc
aggtatcttcaggatcaacatgaggaagcgctgaaacttttaaaccaatcagaggagacc
atcagggagagttacggtgatgagagtgagaagcggctgattgtgacgtatggagacatg
gcctggctgaaataccatgatggagactttgcacagtcacaaagctactgtcagaaagtc
gaggacatactggtgaaatatcccactggttcatcaggaggtctccttccagaggtgtac
ggggaacaaggctgggcctatttcaaggtgtcgaggtcttctatatcaaaagccatcgac
tgttttcgtaaagcacttgaggtacagactcatgatgttgagtggaacacctgctacgcc
gttgtcctcttttgcggagaacagtgggttttagaaaacttacagaaacataagaaatcc
caggccatcaaacagcttcgctttgcattggagatcaacccaaataacgctgctctgcag
tgcatgctgggtgcgaagctgggggcctataagaaatacgaagaggctgagagtctggtg
atgaaagcactagaaaatgatcctgataaccctcatatcctccgccactcaggaaaatac
ttacgtaatcggaatcgactggatgaggctattgttgtgtttgagcgaggactgaaaagg
ggcgatcaattatcttccttcaactaccagctggctctgtgctacaagcagaaaataatt
gctgaggagtgtcgcaggcgcttcagcaacagagaagaggtgcgtaagtggaggcgtatt
tgtatcagtcaccttgaagaatctgtgaagaggaagagaccttttgtccgggcgtgggct
gaactggcactgctgtgtgcagaagcaggggatatgagcagggctgaggaggcctatcag
cagtgcttgaagaagttaccagaggtggaggaggaaaaggattgtcagactatccatcag
cgctgcggtgactttcatctttatcacacaaaaaatgaggctcaagccatcgctcactat
accaaggggctgctgataccactgaaaaaatatgagtggagacagtgtgctaagaaactg
aagcagatcgctgagagacgtctggcaaagaatcggggtgatggtgaagctctcgctctg
ctgggtcaggtggccagagctgagggcgacagcaagaaagctgcttttttttatgagaaa
gctctgaactatgacaaggacaatgaagagtacctgtctgctctgtgtgagctgcgcctg
gagctgcagggatcatcctctgattaa
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