Oreochromis niloticus (Nile tilapia): 109197029
Help
Entry
109197029 CDS
T06104
Name
(RefSeq) ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onl03036
]
109197029
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109197029
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109197029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109197029
NCBI-ProteinID:
XP_019207517
Ensembl:
ENSONIG00000030258
UniProt:
A0A669EC09
LinkDB
All DBs
Position
LG23:7454460..7465444
Genome browser
AA seq
651 aa
AA seq
DB search
MDEWEEQETATSGTCALTSDTSTGGTQGDFWNSDHGEFQGGRGGRGRGRGGFKNSFFSGA
EDGANDGDGQNNTAERSSFSRRGGCGRGRGRGFGRTDHSDFDANEEDGDNKNVSRGRRGG
RGGSYRQGGEQGGRDGFGGGYRGKDEEVFAQGHGDTPAENADASDRPRVTYIPPPPSEDE
ESIFSHYESGVNFDKYDEILVDVSGTNPPPAIMTFDEAALCESLKRNVSKSGYVKPTPVQ
KHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADGAAASCFSEMQEPDAIIVAPTR
ELINQIYLEARKFAYGTCVRPVVVYGGVSTGHQIRDLSRGCNVLCGTPGRLLDMIGRGKV
GLTKVRYLVLDEADRMLDMGFEPDMRRLVGSPGMPSKENRQTLMFSATFPEDIQRLAADF
LKTDYLFLAVGIVGGACSDVEQTFVQVTKFAKREQLIDLLKSTGSERTMVFVETKRQADF
IATILCQEKFPTTSIHGDREQWQREQALGDFRSGKCSVLVATSVGARGLDIPDVQFVVNF
DLPNNIDEYVHRIGRTGRCGNTGRAVSFYDPVADSELARSLVTILSKAQQEVPSWLEESA
FSGHSPSGFNPPRKHFASTDLRKGPQGGFFQDGSVTSQLAVQTAADDEEWE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtgggaagaacaggaaaccgctacctctggtacttgtgcactcaccagcgac
acctcaactggaggtacacaaggagatttctggaactctgatcatggtgaatttcaagga
ggtcgtggtggacggggtagaggaagaggaggatttaaaaactcattcttctcaggtgct
gaggacggtgcaaacgatggtgacggccagaataatacagcagaaaggagtagcttcagc
cgaagaggaggctgtggtagggggcgtggcagaggatttggcagaacggatcacagtgat
tttgacgccaatgaagaggatggtgacaataaaaatgtgtcgagaggaagaagaggaggc
agaggaggaagctataggcaaggtggtgagcagggtggcagagatggctttggaggaggc
taccgtgggaaagatgaagaggtctttgctcaggggcacggggatacacctgcagagaac
gcagatgcgagtgatagacccagggttacctacatccccccaccaccctctgaagatgag
gagtccattttttcccactatgagtccggtgtcaactttgacaagtacgatgagatcttg
gtggatgtcagtggaaccaacccaccaccagctataatgacatttgatgaagcagcgctg
tgcgagtccctaaagagaaacgtcagcaagtctggttatgtgaagcccacgcctgtgcag
aagcacggcatccccatcatttctgctggcagggatctcatggcctgcgcccagactggg
tctggaaaaacggctgccttcctgctcccaatccttcaacagctgatggcagatggtgcg
gcggccagttgcttcagtgagatgcaggagcctgatgccatcattgtggcaccaactagg
gagctgatcaaccagatttacctggaggccaggaagtttgcctatgggacatgtgtgcga
cctgttgtagtgtatggtggagtcagcactggacaccaaataagagacctctcgaggggc
tgtaatgtgttgtgtggaacaccaggacgactgctggacatgattggaagaggaaaggtt
ggcttgactaaagtgcgttacttggtgctggatgaggctgaccgcatgttggatatgggg
tttgagcctgacatgcgccgcctggtgggctctcctgggatgccatcaaaagagaaccgt
cagactctgatgttcagtgctactttccccgaggacatccagaggcttgcagctgacttt
ctaaagactgactatttgttcttggccgtgggtattgtgggtggagcctgcagtgatgtg
gagcagacatttgtgcaggtcaccaagttcgcaaagagggagcagcttatagacctcctg
aaatcaacaggatcggagcgcaccatggtgtttgtagagaccaagagacaggctgatttt
attgccacaatcttgtgtcaggagaagtttccaactaccagcattcacggtgaccgtgag
cagtggcagcgagagcaggcccttggagacttccgctctggcaaatgttctgtcctggtg
gcaacctctgtaggtgcccgtggactcgatattccagatgtgcagtttgttgtgaacttt
gacctcccaaacaatatcgacgaatatgtccatcgtattggtagaaccggccgctgtggc
aacaccgggagggcagtgtccttctatgatccagtagctgacagtgagttggctcgatca
ctggtcacaatcctgtccaaggcccagcaggaggttccctcgtggttagaggagtctgct
ttcagcggccatagcccctctggctttaacccacctaggaagcattttgcctccacagac
ttgaggaagggtccacagggaggctttttccaggacggcagtgtaacgagccagctggca
gtacagacggctgctgacgatgaagaatgggagtga
DBGET
integrated database retrieval system
