Oreochromis niloticus (Nile tilapia): 109197635
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Entry
109197635 CDS
T06104
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
109197635
04121 Ubiquitin system [BR:
onl04121
]
109197635
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109197635
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109197635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
GSH_synth_ATP
THEG4
Mif2_N
Motif
Other DBs
NCBI-GeneID:
109197635
NCBI-ProteinID:
XP_019208743
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All DBs
Position
LG9:complement(3725106..3727899)
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AA seq
611 aa
AA seq
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MLVAKRNCTSAVWEYFGFKRDDVAQSQVLCKTCLGRVSTSRGNTTNLYQHLKTQHKTEYD
RCMAKKSSSVQNKPSNVTRQGSLTELFEGVTPYERTSKRHVEITKAVTHCIAKDMMPVNT
VTKPGFNNLVTTLDKRYRMPSRTYFSQTAIPELHMQCRRRVAAELKAVEFFAATTDMWSS
RTAEPYQSLTVHYITEDLHLEARSLQTAYFPEDHTGENIAAGLREGLACWDLPEDNLVCI
TTDNASNMVKAAQLNEWTRLQCFGHRLHLAIENAIKDGRVSRAIGLCKKLVGHFSHSWKK
KAALTEAQKELKLPEHSLITECPTRWGSKEKMIARVLEQMKAISQVLTGDRHARSLIPTW
QDAEVLESIHKALHPLSEFTDALSGEEYVSISYLKPVLHLLATSVLAEDAEDTDLTRSIK
TKVLAYLNDKYSDLNTQELLDVASFMDPRFKTQYISADNLPAIKARLKTEMVESARRTHN
QEKRSRTETAQNSPSAQASGGKAKKTLGSLFKTSAASSALPLPLEDVVEAELNSYLLTPV
IDGEDDPLAWWKVHNIHFPRLCKMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPAK
VDMLVFLAKNL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctagtagcaaagaggaactgcacatcagccgtgtgggaatattttgggtttaaaaga
gatgatgtcgcacagagtcaggtactgtgtaaaacctgtcttggtagagtttctacatct
cggggaaacactacgaatttgtaccagcaccttaagactcagcacaaaacagagtatgat
agatgtatggctaaaaaatctagtagtgtgcagaataaacctagtaacgttactcggcaa
ggatcactgaccgaactgtttgaaggtgttacaccatatgaacgcacttcaaaacggcac
gtggaaatcaccaaagcagtaacccactgcattgcgaaagacatgatgcccgtcaatacg
gtgaccaagcctgggttcaataatttggtaactacactggataagaggtacagaatgccc
tcccgcacgtatttcagtcagactgcaatacccgagctacatatgcaatgtaggcggagg
gttgcagcggagttaaaggctgttgagttttttgcggcgacaacagacatgtggtcaagc
cgtacagcagagccctatcaaagtctgacggtgcattacattaccgaagacctccacctc
gaagctcgcagcctacaaacggcctacttccccgaagaccacacaggggaaaacattgct
gctggcctgagagaggggcttgcgtgttgggatctccctgaagacaaccttgtctgcata
acgacggacaacgcgtcaaatatggtgaaagcagcacagctgaacgaatggaccaggctc
cagtgtttcggacacagattacatcttgctattgaaaatgcaatcaaagatggtagagta
tcaagagcaattgggctgtgcaagaagttggtggggcacttctcgcacagttggaagaaa
aaggcagcactcactgaggcacagaaggagcttaagcttcctgagcactctctcattact
gagtgccctacaagatgggggtccaaagagaaaatgattgccagagtgctggaacagatg
aaagccatatcgcaggtattgacaggtgaccgacatgcacgctccctcatcccaacctgg
caggatgctgaagtgttggagtccattcataaggcactgcatcctctctccgaatttact
gatgctctttctggagaagagtatgtgagcatctcctacctcaagccagttctccatctt
ctggcaacatcagtcttggctgaagatgctgaggacactgatctgactagatcaattaaa
accaaggtcctggcatacctcaacgacaagtatagtgacctcaacacccaggagcttttg
gatgttgcgtcgttcatggaccctaggttcaaaacgcaatacatcagcgcagacaacctt
cctgccattaaggcccgactgaagacagaaatggtggaatcggctagacgtacacataat
caggagaagaggtctcgcactgaaactgctcaaaattctccaagtgcacaggcctctggg
ggaaaggcaaagaagactcttggtagtctttttaaaaccagtgcggcctcttcagctttg
cctctgccacttgaagatgtcgtggaggcagagttgaatagttacctgttgacccctgtc
attgacggagaggatgatcccttagcctggtggaaggtgcacaacattcactttccacga
ctgtgcaagatggcccgcaaatatctgtgtgtgccagccacaagtgccccctcagagcgt
ctgttcagcactggagggaatatagtgacctgcactcgctcatccttaaagccagcaaaa
gtagatatgctggtcttcctagcaaaaaacctgtga
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