Oreochromis niloticus (Nile tilapia): 109201600
Help
Entry
109201600 CDS
T06104
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
onl04054
]
109201600
Pattern recognition receptors [BR:
onl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109201600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
LRR_6
PRY
PYRIN
SPRY
LRR_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
109201600
NCBI-ProteinID:
XP_019212907
Ensembl:
ENSONIG00000040629
LinkDB
All DBs
Position
LG3:16922945..16944380
Genome browser
AA seq
1131 aa
AA seq
DB search
MEKALPVQLLETLKNLGEEELKLFHFYLQYEPGGEFPKIYKSQLENADRLKTVEVMVQAY
SDHVMEVAMLILEKMKEGSPSAQKASSLSSEEVLQKCRGKLKSKLKKKFQCVFEGIAKAG
NPTLLNQIYTELYITEGGTAEVNDEHEVRQIETASRKPDRPETTIRQEDIFKASPGRDEP
IRTVLTKGVAGIGKTVLTQKYSLDWAEDKANQDIQFIFPFTFRELNVLKEEKFSLVELVH
HFFTETKEAGICSFEDFQVVFIFDGLDECRLPLDFSNTESVTDITESTSVDVLLINFLRG
NLLPSAHLWITTRPAAASQIPPDCVGMVTEIRGFTDPQKEEYFMKRFRDEEKASRIISHI
KISRSLHIMCHIPVFCWITATVLEDVLETREGGQLPKTLTDMFIHFLVVQAKVKKVKYDG
GAETDPHWSPKSRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDVRAASVYSGVFTQIF
KEESGLYQDKVFCFIHLSVQEFLAALHVHLTFINSGIDLLQEQQTTSMWSKLFNTPRLKS
LHQSAVDKALQSPNGHLDLFLRFLLGLSLQTNQTLLRGLMSQTGSSSQTNQETVQYIKKK
LSDNLSAEKSINLFHCLNELNDRSLVEEIQQSLRSGSLSTDELSPAQWSALVFILLSSEK
DLDVFDLKKYSASEEALLRLLPVVKASNKAVVSDCFLSERSCEALSSVLSSQSSSLRELE
LGNNNLCHSGMMLLSTALEHPHCTLESLRLSGCFLSMKSYEALTSVLSSQSSSLRELDLS
NNNLQDSGIKLLSAALQSRHCILKSLRLSVCNLSGRSCEVLALVLSFTSSSLGELDLSDN
DLEDSGVKLLSDALESPHCKLESLSLSHCLITEEGCTFLASALSSNPSHLRELDLSYNHP
GDSGIKLLSAGLKDPGWRLDIDTNTVNTNLQLSDNNRKVTHVMEVQSYPDHPDRFDVYRQ
LLCRNGLTGRCYWEVEWRGDVYISVSYRRIRRKGNSDACLFGHNDQSWSLECSDDGPRSV
WHNNRHTSISSSSSSSSVSNRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFTETLYPG
FWLWSGSSVSLFLVLGLEIRTPKPVRECRSESGVCEERTFPSAPLCPSGAE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggccttaccagttcagctgcttgaaacgttgaagaatttgggagaggaggag
ctgaagctttttcacttttacctgcagtatgaacctggaggtgaattccccaaaatctat
aagagccagctggagaatgcagacaggctgaaaactgtagaagtgatggtgcaggcgtat
tcagaccatgtgatggaggtagcgatgttgattttagagaagatgaaagaaggaagtccc
tcagcacagaaagcttcatcactttcatcagaagaggttcttcaaaagtgtcggggtaaa
cttaaatctaagctgaagaagaagttccagtgtgtgtttgaggggatcgctaaagcagga
aacccaacccttctgaatcagatctacacagagctctacatcacagagggagggactgca
gaggtcaatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacaga
ccagaaacaacaatcagacaagaagacatctttaaagcctcacctggaagagatgaacca
atcagaacagtgctgacaaagggagtggctggcattgggaaaacagtcttaacacagaaa
tacagcctggactgggctgaagacaaagccaaccaggacatccagttcatatttccattc
actttcagagagctgaatgtgctgaaagaggaaaagttcagcttggtggaacttgttcat
cacttctttactgaaaccaaagaagcaggaatctgcagctttgaagacttccaggttgtg
ttcatctttgatggtctggatgagtgtcgacttcctttggacttcagcaacacagagagt
gtgactgatattacagaatccacctcggtggatgtactgctgattaacttcctcagggga
aatcttcttccctctgctcacctctggataaccacacgacctgcagcagccagtcagatc
cctcctgactgtgttggcatggtgacagagatcagagggttcactgacccacagaaggag
gagtacttcatgaagagattcagagatgaggaaaaggccagcaggattatctcccacatc
aagatatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctggaggatgtgctggaaaccagagagggaggacagctgcccaagaccttgact
gacatgttcatccacttcctggtggttcaggccaaagtgaagaaggtcaagtatgatgga
ggagctgagacagatccacactggagtcccaagagcaggaagatgattgagtctctggga
aaactggcttttgatcagctgcagaaaggaaacctgatcttctatgaatcagacctgaca
gaatgtggcatcgatgtcagagcagcctcagtgtactcaggagtgttcacacagatcttt
aaagaggagagcggactgtaccaggacaaggtgttctgcttcatccatctgagtgttcag
gagtttctggctgctcttcatgtccatctgaccttcatcaactctggaatagatctgctg
caagaacaacaaacaacctccatgtggtctaaattatttaatacaccaagactaaaatct
ctccaccagagtgctgtggacaaggccttacagagtccaaatggacacctcgacttgttc
ctccgcttcctcctgggtctttcactgcagaccaatcagactctcctacgaggtctgatg
tcacagacaggaagtagctcacagaccaatcaggagacagtccagtacatcaagaagaag
ctcagtgataatctgtctgcagagaaaagcatcaatctgttccactgtctgaatgaactg
aatgatcgttctctagtggaggagatccaacagtccctgagatcaggaagtctctccaca
gatgaactgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaaaaa
gatctggatgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctg
ctgccagtggtcaaagcctccaacaaggctgtagtgagcgattgtttcctctcagagaga
agctgtgaagcgttgtcctcagttctcagctctcagtcctcaagtctgagagagctggag
ctgggtaacaacaacctctgccattcaggcatgatgcttttgtctactgcactggagcat
ccacactgtaccttagaaagtctaagattaagtggatgttttctttcaatgaaaagttat
gaagcactgacctcagttctcagctcccagtcctctagtctgagagagctggacttgagt
aacaataacttacaggattcaggaataaaacttctgtctgctgcgctgcagagtcgacat
tgtatactcaaatctctgagacttagtgtctgtaacctgtcagggagaagctgtgaagtt
ctggccttagttctcagcttcacgtcctctagtctgggagagctggacctgagtgacaat
gacctggaggattcaggagtgaagcttctgtctgatgcactggagagtccacattgtaaa
ctagaaagtctcagtttgtcacactgtctgatcacagaggaaggctgtacatttctggcc
tcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatcca
ggagactcaggaattaagctgctgtcggctggactgaaggatccaggctggagactggac
atcgacacaaacacagtgaacacaaacctccaactgtctgacaacaacaggaaggtgaca
catgtgatggaggttcagtcatatcctgatcatccagacagatttgatgtttatcgtcag
ctgctgtgtagaaatggtctgactggtcgctgttactgggaggtcgagtggagaggagac
gtttatatatcagtgagttacagaagaatcagaaggaaaggaaacagtgatgcctgtttg
tttggacacaatgatcagtcctggagtctggagtgctctgatgatggtcctcgttctgtt
tggcacaataacagacacacatccatctcctcctcctcctcctcctcctctgtctctaac
agagtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctct
gacactctgatccacctccacaccttcaacaccacattcactgaaactctttatcctggg
ttttggctctggtctggttcctcagtgtccctatttctcgtgcttggtttggaaatcagg
acacctaagcctgttcgtgagtgccgcagtgagagtggcgtgtgtgaggaaaggaccttt
ccaagtgcaccgctctgcccgagtggggcggagtaa
DBGET
integrated database retrieval system
