Oreochromis niloticus (Nile tilapia): 109202510
Help
Entry
109202510 CDS
T06104
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109202510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
109202510
03009 Ribosome biogenesis [BR:
onl03009
]
109202510
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109202510
Spliceosome [BR:
onl03041
]
Complex A
U2 snRNP components
U2 related factors
109202510
Complex B
109202510
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109202510
Ribosome biogenesis [BR:
onl03009
]
Eukaryotic type
90S particles
Helicases
109202510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109202510
NCBI-ProteinID:
XP_025763653
LinkDB
All DBs
Position
LG6:complement(19321323..19326566)
Genome browser
AA seq
413 aa
AA seq
DB search
MHILLLCAAEIPFKQTDSHLSGFKYFTSLCFFPQVVVSTNIAETSLTIDGVVFVIDPGFA
KQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEI
LRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMM
AEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDG
DHLTLLNVYHAFKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTS
RDYYINIRRALCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLT
TKNYIRTCTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERIIAKLESKEYSQY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcacattttgcttttgtgtgcagcagaaatcccttttaaacaaacagattctcaccta
tcaggtttcaaatattttacatcactttgcttcttccctcaggttgtggtgtcgacaaac
atcgctgagacttctctaacaattgatggcgtggtgtttgtcattgaccctggatttgcc
aaacaaaaggtgtacaatcctcgaatcagagtggagtctctgctcgtcacagccatcagt
aaagcttctgcccagcagagggcaggacgagctggaagaacacgtccagggaaatgcttc
cgtctctacacagagaaggcctacaaaacagagatgcaggataacacataccctgagatt
cttcgctcaaacttgggatctgtagtgcttcagcttaaaaagctgggtattgatgacctc
gtccactttgacttcatggatccacctgctcctgagacgttgatgagggcccttgagctg
ctgaactacctggcagctctcaatgatgatggtgacctgacagagctaggatccatgatg
gcagaatttcctctggacccccaactggcaaagatggtcattgcaagctgcgagtttaac
tgctccaacgagatcctttccattactgccatgttgtcagtcccacagtgttttgtccgt
cctacggaggctaagaaggcagcagacgagtccaagatgaggtttgctcacattgacgga
gaccacttgacgctgctcaacgtctatcacgccttcaaacaaaaccatgagtctaaccag
tggtgctatgacaactttgtcaactaccgctcgctgatgtctgccgacaatgtgcggcag
cagctgtccaggatcatggaccgcttcaacctgcctcgtcggagcacagagttcacaagc
agagattactacatcaacatccgacgggcgctctgcaccggcttcttcatgcaggtggct
catttggagcgcacaggccattacctcacagtgaaagacaaccaagtggtccagctgcac
ccatctacagtcctggaccacaaaccagagtgggtgctctacaacgagtttgtcctcacc
accaagaactacatccgcacatgcacagacatcaagccagagtggctggtgaagattgca
cctcaatactacgaaatgagtaacttcccacaatgtgaagctaagcgacagctggagcga
atcattgccaaactagagagcaaagagtattcccagtactga
DBGET
integrated database retrieval system