Oreochromis niloticus (Nile tilapia): 109202667
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Entry
109202667 CDS
T06104
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109202667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
109202667
03036 Chromosome and associated proteins [BR:
onl03036
]
109202667
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109202667
Coactivators
SAGA/TFTC/STAGA complex
109202667
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109202667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
109202667
NCBI-ProteinID:
XP_019216110
Ensembl:
ENSONIG00000002889
UniProt:
A0A669BT06
LinkDB
All DBs
Position
LG1:31844039..31934840
Genome browser
AA seq
1096 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNPAGKADENGGAGSVAPSNHHLGK
TLPAPVSTTTLEQQQQQQGRRNKTEMRQEINSKDVSPDKTVTSPSPGCSPSFGEPSTTSG
ACVSATSSGSQSHGASITTLTASGVSTLASSPPASISTTTSSRGSKVTVGTGETSTGATP
PRKRITTPRRSASARIKSLNGAAVTTRRNSNTAVVDNVSPVDTSASTPNCGRPVTTSINT
STFTLSNASLPVGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTSVSALVQQGARIGP
VTSSASPGNQTKMVTDTGASKTDDCQSKIVMLTQSSGVNSVVNTVSTSSPPLPPPSSTSS
SSIVTPPTTTTAAATTTITITQPLSSITPAACVTGMATISACGAGQTTSVTTTITMVRPT
APSPTPAVATSAQSQPRPGLTAPQRIVTPQLIVRPPQQQTTIQLPPGFTIPQGMVLVRTE
LGQLVMVPQQALAQAQAQAQAQAQAQAQNNISPRPATPTTGTSFRVTSPQQSPVTSQTSR
QCPLTPAKMAPSPSPTPSSPALQTSSSSSSSSSSSCPALRPKGPVAPVVAVTAPQQTPVV
LPPQAPAQPASQPVQPAQPAIATASGASVASQEMQENVKKCKNFLATLIKLASHNSPSPE
TSKNVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSL
TQPPQQGLKPAPCGTPPAIVAGPAVRIRHPNSVSTTTGASALPAGTLGHAAAMGVKTGGA
VGGQVRMPVVITQSIRAQGTMGKGAIIQAGKSPMGLPVQITGNQKNKLNDPGGGTFRDDD
DINDVASMAGVNLNEESARILATNSDLMGTQIRSCKDEAFLHPGLLHRRIQETAKKFGIT
EVPMETVTFISHATQSRLRTVVEKVSTIAQHRLDSCKDDECYEQSADVRSQLRFFEQLER
IEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAI
GPRKKRKVDSPGATPSGTEVSGSTAGSPASSSAPSTSSRQYTRQRITRVNLRDLIFYMEQ
ERETAHSLLLYRALLK
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcggaggtggatgaaaaagct
gtgagcgacctagtgggctcattggagtcacagcttgctggacaaagcaacccggctggt
aaagcagacgaaaacggaggcgctggctctgtggccccctctaaccatcacttaggaaaa
acgctaccagctccagtgagcaccacaacactagaacaacaacaacaacaacaaggacgc
cgaaataaaactgagatgcgccaggagatcaactctaaagacgttagcccggataagact
gtcacatctccttcaccgggctgcagcccttcttttggcgagccttccaccacttcgggt
gcctgtgtgagcgccactagcagcggctcgcaatcacatggagcatccatcacaacactg
actgcatctggtgtgtcaactttggcatcttcgccgccagccagcatcagcaccactaca
tccagccggggctctaaagttaccgtgggcacaggcgagacgtcgacgggagcaaccccg
ccgagaaaacgcataacgacgccgcggaggagcgcttcggcgcggataaagagtttgaac
ggcgcagctgtaacaacgcggaggaacagcaacacggcggtggtcgacaacgttagccca
gtggatacgagtgcaagtacaccaaactgtggacgacccgtcacaacctctattaacact
tcgacgttcaccttatccaacgcgagcctgcctgtgggtcagtcggctattgctctcgac
agggggactcctactattgctttgcatagactcccgagtcatattgttgccagtatagcc
cagaacggcaacgggaccagtgtttcggccttggtccagcagggtgctcgtataggaccc
gttacctcttcagcttccccggggaaccaaaccaaaatggtcacagacactggggcttcc
aaaacagacgactgtcagtccaaaattgtaatgttaacccagtctagcggtgtcaactct
gtagtaaatactgtttccacttcctctcctcctcttcctcctccttcttctacttcttct
tcgtctattgtcacaccaccaacaactactacagctgcagcaacaacaacaataacaata
actcagcctctgagctccatcacacctgctgcgtgtgttacagggatggcaactatttca
gcatgtggagctggtcagaccacatcagtgaccaccactattactatggttaggccaaca
gctccctctccaacacctgctgtggctacatctgcacagtcgcaaccccgtcctggactt
acagcaccacaaaggattgtaaccccccaactgattgtcagaccgcctcagcagcagacc
accattcagctgccccctgggtttaccatcccacaaggtatggtgttggtacgcacagag
ttaggacagctggtaatggttccccagcaggctttggctcaagctcaagcacaagcacaa
gctcaagcccaagcccaggcccagaacaacatttctccacgacctgctacccccaccaca
gggacatccttcagagtaacctctccacagcaatctcctgtgacctctcagaccagcagg
caatgtcctttgaccccagccaagatggcaccgtctccttctcctactccttccagccct
gccctccagacttcttcttcctcttcttcttcttcttcctcctcctgccctgcactccgc
ccaaagggccctgtggcaccggtcgtggctgtgacggctccgcagcagacccccgtggtt
ttgcctccccaggccccggcccagcctgcctcccagccagtgcagcctgcacagccggca
atcgccacggcctctggagcttctgtcgcatcccaggaaatgcaagagaatgttaagaag
tgtaagaatttcctggccacacttatcaagctggcatctcacaattctccgtcccccgag
acgtctaagaacgtcaaggctcttgttcaggacctgctggatgccaaaatcgaaccggaa
gagttcaccagccgactgcagacagagctcaagtcatctccgcagccttacctggtaccc
tttctcaagaagagcctcccagccctgaggctgtctttgctgaatagtcagcagtctctg
acccagcccccgcagcagggactaaaaccagcaccctgtggcacccctcctgccatcgtc
gctgggccagctgtccgcatacgccaccctaatagtgtcagcaccactacgggtgccagt
gcactgcctgctgggacgctcggacatgcagctgcaatgggtgtcaagacaggaggcgct
gttggtggccaggtccggatgcctgtggtgattacgcagtccatcagagcgcaaggcaca
atgggaaagggagccataatccaagcaggcaaaagtcccatgggcctgcctgttcagatc
actgggaatcagaaaaacaagctcaatgaccccggaggaggcacattcagggacgatgat
gacatcaatgatgtggcttctatggctggggtgaacctgaatgaggaaagtgccagaata
ctcgccaccaactctgacctcatgggaacgcagatccgctcatgtaaagacgaggccttt
cttcatccggggctgctacaccgacgaattcaagaaacagctaaaaagtttggaattacg
gaagtccccatggagacagtgacattcatctcacacgccacgcagtcacggcttcggacg
gtagtagaaaaggtttctactattgcacagcaccgactggactcctgtaaggatgatgag
tgctacgagcagtctgcagacgttcgctctcagcttcgcttctttgagcagctggagaga
atcgagaagcagcggaaggatgagcaggagagagagatccttttgaaagccgctaaaagt
cgctccaggcaagaagacccagagcaagctcgactgaaacagaaagctaaggagatgcaa
caacaggaactggcccagatgaggcagcgggatgccaaccttacagcactagccgccatt
ggaccccgaaaaaaacgtaaagtggattcaccaggggccacaccatcagggaccgaggtt
tccggcagtacagcaggctccccagccagctcatccgccccatccacctcatcacgccag
tatacgcggcagcgcatcactcgtgtcaacctcagggacttaattttctacatggagcag
gagagagagaccgcccactcgctcctcctttaccgtgccctgctcaagtag
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