Oreochromis niloticus (Nile tilapia): 109203209
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Entry
109203209 CDS
T06104
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04060
Cytokine-cytokine receptor interaction
onl04217
Necroptosis
onl04620
Toll-like receptor signaling pathway
onl04621
NOD-like receptor signaling pathway
onl04622
RIG-I-like receptor signaling pathway
onl04623
Cytosolic DNA-sensing pathway
onl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109203209
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
109203209
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109203209
04621 NOD-like receptor signaling pathway
109203209
04622 RIG-I-like receptor signaling pathway
109203209
04623 Cytosolic DNA-sensing pathway
109203209
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109203209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
onl04052
]
109203209
Cytokines and neuropeptides [BR:
onl04052
]
Cytokines
Interferons
109203209
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Gene cluster
GFIT
Motif
Pfam:
Interferon
3H
DUF2158
baeRF_family3
Motif
Other DBs
NCBI-GeneID:
109203209
NCBI-ProteinID:
XP_019218001
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All DBs
Position
LG8:6973175..6974184
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AA seq
186 aa
AA seq
DB search
MINRVFFACLFLGLVTAGSSLSCKWMDDKFKQHNEETLKLLDTMANNSTNITEVEVTVPF
PNHLYRQVSKSSAEDKLAFTVQVLEEVAALFEEDHSSASWEDSTVRNFLNIVNKQAEELL
SCIGSHSHKKKNSQLYFKTEMYFKRLSDDVLKKKGHSAEAWEVIRKETKAHLMRAEQLAS
SLHTVN
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacagggttttctttgcttgcctgtttctcggtctggtcactgcaggctcctcg
ttgagctgcaaatggatggatgataaattcaaacagcacaacgaagaaactctgaaacta
cttgataccatggctaataattccactaacatcactgaagtggaggtcaccgtgcccttc
cctaatcacttgtaccgccaggtgtccaaatcatcagctgaggataaactggctttcaca
gttcaggttctggaggaggtggctgccctgtttgaggaggatcacagctctgcatcatgg
gaggacagcacagtgaggaactttctcaatattgtcaacaaacaggctgaagagcttctc
tcctgtattgggagccacagtcacaagaagaagaactcacagctgtatttcaagacagaa
atgtatttcaaaaggctttcagatgatgtcctaaagaagaagggtcacagtgctgaagcc
tgggaggtgatcaggaaggaaaccaaagcccatctcatgagagcagaacagctggcttca
tctctgcacactgtcaactaa
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