Oppia nitens: 128952955
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Entry
128952955 CDS
T11717
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ont
Oppia nitens
Pathway
ont04120
Ubiquitin mediated proteolysis
ont04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ont00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128952955
04120 Ubiquitin mediated proteolysis
128952955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ont04121
]
128952955
Enzymes [BR:
ont01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128952955
Ubiquitin system [BR:
ont04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128952955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_11
Vir1p
zf-C3HC4_2
zf-RING_16
zf-C3HC4_3
zf-RING_5
zf-HC5HC2H
FAR1_N
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
128952955
NCBI-ProteinID:
XP_054154407
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MLSTEMRSLLITMASAVLTTTVIGNAFYQKKQFYPSVVYITKSNPSMAIIYIQAFVVVLL
MGKLMRKIFFGQLRTAEMEHLIEKSWYAVTETCLAFTVFRDDLSPKFVALFTLLLFLKCF
HWLAEDRVDYMERSPNISLLFHIRVISLLFLLGSLDFWFIHMAYYSTLTKGASVQLVFGF
EYAILFAVVFNILMKYVLHFVDLQNENPWEDKAVYLLYTELMMGFLKVILYLSFITIMMK
IHTFPLFAIRPMYLSMRAFKKALNDVIMSRRAIRNMNTLYPDATSEDLQSSDNVCIICRE
EMTGNGSAKKLPCNHMFHISCLRSWFQRQQTCPTCRMDVLRNIPNVSADNVRAQQQQQQQ
QQQPRVQQPLPPMPQFFIPPNWQAFAAGFPQQQPNLANQNNNNNNDNVNNNNNNNQTNNN
NNNNNNQTNNNNNNNNNQNVPNAGSQANRTTTAPSFIPFPPFVPFMAPPMPTPPQDLSRL
SLEELRNLEGQERQNVEARIRCLRNVQTLVEAALLQLQQYNTVTNQMTASQTVSSDTPST
SGATATTSAGVASTSSNSSGDTLPVRAPNDPQEILRQRRLQRFSQTQPPIIDSNTETIVT
DQSASQSQASNSSNQISDSNNDKKT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaacagaaatgcggtcactgttgataacgatggcgagtgctgtgttgaccact
actgtcatcggcaatgctttctatcagaagaaacaattttatccttcagttgtttacatc
accaaatctaacccatcgatggctataatatatattcaagcctttgtggtcgtcctatta
atgggaaaattgatgcgaaaaatattttttggacaattaagaactgcagagatggaacat
ttaatagagaagtcatggtatgccgtcactgaaacgtgtctcgcctttactgtcttcaga
gatgacttatcaccaaaatttgtggcactcttcacattattgttattcttgaagtgtttc
cattggttggctgaagacagagtggattacatggaaaggagtcctaatatatcacttctt
tttcatatacgtgttatatcacttctctttcttctgggaagtcttgacttttggtttatt
catatggcatactatagtactcttacaaaaggagcgtccgttcaattggttttcggcttt
gagtacgctattttgtttgccgttgtcttcaatatacttatgaaatatgtattacatttc
gttgatcttcaaaacgagaatccctgggaagataaagccgtatatctattatatacagaa
ctaatgatgggtttcttgaaagtcatattgtatttatcttttataacaattatgatgaaa
atccatactttcccactgtttgctatccgtccaatgtatttgagtatgagagcctttaag
aaagctctaaacgatgttataatgtctcgaagagccataagaaatatgaatacactttat
ccggacgcaacttctgaagatctacagtcttcagacaacgtatgtatcatttgcagagaa
gaaatgactggaaatggaagcgctaagaaattgccgtgtaatcacatgtttcatatatca
tgtctacgttcatggtttcaaagacaacaaacttgtccgacctgtagaatggatgtcctc
agaaatattccaaatgtgagcgcagacaatgtcagagctcaacagcagcagcaacaacaa
caacaacaacccagagtacaacagccattaccaccaatgcctcaatttttcatacctcct
aattggcaggcatttgctgctggctttcctcaacaacaacctaacttagccaatcagaat
aataataacaataatgataatgttaacaataataataataataatcaaacaaataataac
aataataataataataatcaaacaaataataacaataataataataataatcaaaatgtt
ccgaatgccggttctcaagcaaataggacaacaactgctccttcatttatcccattccct
ccatttgttccatttatggcaccaccgatgccgactccaccacaagatttgagtcgactg
tcattagaagaattacgaaatcttgagggacaggaacgacaaaatgttgaggcaagaatt
aggtgcttaagaaatgtacagacattggttgaggcagctttgcttcaactacaacaatac
aatactgttacgaatcaaatgactgcatcacaaacagtctcatcagacacgccttctact
tcaggcgcgaccgcaactacttctgcaggtgtcgcgtccacttcaagtaacagttctggc
gatacattaccggtgagggcacccaacgatccgcaagaaatattacgccaaagacgtttg
cagcgtttctcacagactcaaccaccgattattgactcaaacactgaaacaatagtcact
gatcagtcagcttctcaaagtcaggcctccaactcatccaatcagatatcagattcaaat
aatgataaaaagacatga
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