KEGG   Oppia nitens: 128954833
Entry
128954833         CDS       T11717                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
ont  Oppia nitens
Pathway
ont03082  ATP-dependent chromatin remodeling
ont03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ont00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    128954833
   03083 Polycomb repressive complex
    128954833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ont03036]
    128954833
Chromosome and associated proteins [BR:ont03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     128954833
  Histone modification proteins
   HAT complexes
    HATB complex
     128954833
   HDAC complexes
    Sin3A-HDAC complex
     128954833
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     128954833
    PRC2.2
     128954833
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     128954833
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    128954833
  Chromatin remodeling factors
   NuRD complex
    128954833
   NuRF complex
    128954833
   NuRF complex (fruit fly)
    128954833
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 CAF1C_H4-bd WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st EIF3I DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_WDR3_2nd WD_LRWD1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_RIG_1st WD40_MABP1-WDR62_1st ASA1 eIF2A Beta-prop_SPT8 Beta-prop_IFT140_1st PAC11 Beta-prop_WDR41 NBCH_WD40 MIOS_WD40 Tricorn_2nd Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 128954833
NCBI-ProteinID: XP_054156410
LinkDB
Position
Unknown
AA seq 420 aa
MADKDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVRPEGKDYSIHR
LILGTHTSDEQNHLLIASVQLPNEDAMFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEG
EVNRARFMPQNPCIIATKTPSSDVLIFDYTKHPSKPDPNGECAPDLRLRGHQKEGYGLSW
NPNLNGHLLSASDDHTICLWDINAPVRDKNIVDAKTIFTGHTAVVEDVAWHLLHESLFGS
VADDQKLMIWDTRSANTNKPSHIVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDSEDGPPE
LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENIYNDEEPETPAAELEAAA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggccgataaggacgccgtcgaggagcgtgtgatcaacgaagagtacaagatatggaag
aagaacacaccgtttctctacgatctggttatgacacacgctttggagtggccatcacta
accgctcagtggttgcccgatgttgtgcgacccgaaggcaaggactattccatacatcgg
ctaatactcggcactcataccagcgacgaacagaatcacctgttgatagcatcggttcag
ttgcccaacgaagacgctatgtttgatgcctcccattacgactcagagaagggcgagttt
ggcggttttggatcggtttcgggtaagattgaaattgagattaagatcaatcacgaggga
gaagtcaatagagcccgctttatgccgcaaaatccgtgcattattgccacgaaaacaccg
tcgagcgatgtattgatctttgattacacgaaacatccctcaaaaccagatccaaatggc
gaatgcgcgcccgatttgagactacgcggccaccaaaaagaaggttacggtctttcgtgg
aacccaaacctcaacggacatctattgagcgcatctgatgatcacaccatctgcttgtgg
gatatcaatgctcccgttcgtgacaagaacatagtcgacgcaaagacaatatttacggga
cacacggccgtcgtcgaggacgtcgcctggcatttgctacacgaaagtctgtttggatct
gtagccgatgaccagaaactgatgatttgggacaccaggtcggccaacaccaacaaaccg
agtcacatagtagacgcccatacggccgaagtcaactgtttgtcgttcaatccgtactcg
gagtttattttggccaccggttcggccgacaaaacggttgccctctgggatctcaggaat
ctgaagctcaaacttcactcattcgagtcgcacaaggatgagatctttcaggttcaatgg
tcgccccataacgaaacaatactggcctccagtggtactgatcgtcgtctacacgtatgg
gatctgtcgaagattggcgaagaacagtcagctgaagattccgaagacggaccgcctgaa
ctgttgttcattcacggcggacataccgctaaaatatctgacttttcatggaatcctaac
gaaccgtggattatctgttccgtgtctgaggacaacattatgcaagtctggcaaatggcc
gaaaacatctataacgacgaagaacctgaaacaccagccgccgaactggaagccgccgca
taa

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