Oppia nitens: 128954833
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Entry
128954833 CDS
T11717
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
ont Oppia nitens
Pathway
ont03082
ATP-dependent chromatin remodeling
ont03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ont00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128954833
03083 Polycomb repressive complex
128954833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ont03036
]
128954833
Chromosome and associated proteins [BR:
ont03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128954833
Histone modification proteins
HAT complexes
HATB complex
128954833
HDAC complexes
Sin3A-HDAC complex
128954833
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
128954833
PRC2.2
128954833
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
128954833
Heterochromatin formation proteins
Other heterochromatin formation proteins
128954833
Chromatin remodeling factors
NuRD complex
128954833
NuRF complex
128954833
NuRF complex (fruit fly)
128954833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
ASA1
eIF2A
Beta-prop_SPT8
Beta-prop_IFT140_1st
PAC11
Beta-prop_WDR41
NBCH_WD40
MIOS_WD40
Tricorn_2nd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
128954833
NCBI-ProteinID:
XP_054156410
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MADKDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVVRPEGKDYSIHR
LILGTHTSDEQNHLLIASVQLPNEDAMFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEG
EVNRARFMPQNPCIIATKTPSSDVLIFDYTKHPSKPDPNGECAPDLRLRGHQKEGYGLSW
NPNLNGHLLSASDDHTICLWDINAPVRDKNIVDAKTIFTGHTAVVEDVAWHLLHESLFGS
VADDQKLMIWDTRSANTNKPSHIVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN
LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDSEDGPPE
LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENIYNDEEPETPAAELEAAA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaggacgccgtcgaggagcgtgtgatcaacgaagagtacaagatatggaag
aagaacacaccgtttctctacgatctggttatgacacacgctttggagtggccatcacta
accgctcagtggttgcccgatgttgtgcgacccgaaggcaaggactattccatacatcgg
ctaatactcggcactcataccagcgacgaacagaatcacctgttgatagcatcggttcag
ttgcccaacgaagacgctatgtttgatgcctcccattacgactcagagaagggcgagttt
ggcggttttggatcggtttcgggtaagattgaaattgagattaagatcaatcacgaggga
gaagtcaatagagcccgctttatgccgcaaaatccgtgcattattgccacgaaaacaccg
tcgagcgatgtattgatctttgattacacgaaacatccctcaaaaccagatccaaatggc
gaatgcgcgcccgatttgagactacgcggccaccaaaaagaaggttacggtctttcgtgg
aacccaaacctcaacggacatctattgagcgcatctgatgatcacaccatctgcttgtgg
gatatcaatgctcccgttcgtgacaagaacatagtcgacgcaaagacaatatttacggga
cacacggccgtcgtcgaggacgtcgcctggcatttgctacacgaaagtctgtttggatct
gtagccgatgaccagaaactgatgatttgggacaccaggtcggccaacaccaacaaaccg
agtcacatagtagacgcccatacggccgaagtcaactgtttgtcgttcaatccgtactcg
gagtttattttggccaccggttcggccgacaaaacggttgccctctgggatctcaggaat
ctgaagctcaaacttcactcattcgagtcgcacaaggatgagatctttcaggttcaatgg
tcgccccataacgaaacaatactggcctccagtggtactgatcgtcgtctacacgtatgg
gatctgtcgaagattggcgaagaacagtcagctgaagattccgaagacggaccgcctgaa
ctgttgttcattcacggcggacataccgctaaaatatctgacttttcatggaatcctaac
gaaccgtggattatctgttccgtgtctgaggacaacattatgcaagtctggcaaatggcc
gaaaacatctataacgacgaagaacctgaaacaccagccgccgaactggaagccgccgca
taa
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integrated database retrieval system