Oppia nitens: 128960468
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Entry
128960468 CDS
T11717
Name
(RefSeq) exosome RNA helicase MTR4-like
Organism
ont Oppia nitens
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
HTH_43
nSTAND3
Motif
Other DBs
NCBI-GeneID:
128960468
NCBI-ProteinID:
XP_054162533
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MDLFDVFDTDNSQTIDHKKRKLDEEEEKECHQVLDQVIGQQINKKVKSTDEEDVQIIEVD
EQNNDNNEDSEEKYEEMVPKTKCHSLEGRESCVHEVVIPTDLEYVALRESHQNANYKAAK
EYAFVLDPFQTEAILCIENNQSVLVSAHTSAGKTVVAEYAIAMSLRDKQRVIYTTPIKAL
SNQKYREFQEEFQDVGLITGDVTINPTASCLIMTTEILRLMLFRGSEIMREVGWVIFDEI
HYMRDRERGVVWEETIILLPDSVHYVFLSATIPNARQFAEWIAHLHHQSCHVVYTDYRPV
PLQHYIYPSGGDGLHMVVDESGNFREDNFNLAMNVLQNAGDAAKGDVAMRGRKGGMKGES
NCLKVIRTIMERNLAPVIVFSFSKKECESYALQMSKLDFNSSEEKELVEEVFNNAIDVLS
DDDKKLPQVEHILPLLKRGIGIHHSGLLPIIKETIEILFGEGLIKALFATETFAMGLNMP
ARTVVFTNARKFDGTDFRWLTSGEYIQMSGRAGRRGLDERGIVILMIDEKMSPSVGKDLV
KGASDPINSAFHLTYNMVLNLLRVEEVNPEYMLQHSFYQFQHYSQYPQLQQKLEELQKQH
NEINVSDEHNVTEYIKLKDQVNGLSQDFLQYITSPRYILPFLTSGRLLKIKSNEDLDMSW
GVVVNYNKKVIKKRSMNPALEESTFYTIDILLNLAKNIDPKTDAIFPPNDGEKGEMKIVT
ISLTNITHISSLRIFIPQDLRSLDNRQSVFKSITEVKKRFTSEDKKVNIPLLDPIEDMKI
SDKEFKGIVKKLEICEKRLTGFCKIDSKAVELLEKKAKISDDIKKVRQNLKKAQSLLQMN
ELKCRKRVIRRLGYCTAADVIEIKGRVACEITSGDELLLTEMLFNGVFNDLNVHQISALL
SCFVFEEKTQQLPKLTEELAKPLRTMQELAKRIATVSIEAKLDLDENAYIEKFKPNLMDV
IYWWTKGATFAQLCKMTDAFEGSIIRCMRRLEELLRQMCQSAKVIGNTDLENKFSEAIKL
IKRDIVFAASLYL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtttgatgtctttgacaccgataatagtcagacaattgaccacaagaaacga
aaacttgacgaagaagaagaaaaggaatgtcatcaagtgttagatcaagtgattggacaa
caaattaataagaaagtcaagtcaaccgatgaagaagatgtccaaattatcgaagttgac
gaacaaaacaatgataataatgaagattctgaagagaaatacgaagaaatggttcccaaa
acaaaatgtcattctttagagggacgtgaatcctgtgttcacgaagtggtcattcctaca
gatcttgaatatgtagcgcttcgggaatcgcatcaaaatgctaactataaggcggcaaaa
gagtacgcatttgttttggatccgtttcagacagaggccatactttgcattgaaaacaat
caaagcgttttagtgtccgctcacacatccgctggtaagactgttgttgccgagtatgca
attgctatgtctttaagagacaaacaacgagtcatatacacgacgccaatcaaagcactc
agtaatcaaaaatatcgcgaatttcaagaagagtttcaagatgtgggtcttattactgga
gatgtgactataaacccaacggcttcttgtcttataatgacgactgagatcttaagatta
atgttgtttcgcggcagtgaaatcatgcgtgaagtcggttgggttatctttgatgaaata
cattatatgagggacagggagaggggtgtagtttgggaagaaaccatcattttattgcct
gattctgttcattatgtgtttctttcggctaccattcctaatgccagacaatttgctgaa
tggatcgcacacttgcatcaccaatcatgtcatgttgtttacaccgattatagaccggtt
ccattgcagcattatatttacccatcgggtggggacggacttcatatggttgtcgatgaa
agtggcaattttagagaagacaacttcaatctcgcaatgaatgtcttacaaaacgctggt
gacgccgccaaaggagatgttgctatgagggggcgtaagggaggcatgaaaggtgaatca
aattgtctgaaagtgatccgaactataatggagaggaatttagcgccggttattgtcttt
agctttagtaagaaagagtgtgaatcatatgcattgcaaatgagtaaattggactttaat
tcaagtgaagaaaaagagttagtcgaagaagtatttaataatgcaatcgatgtattaagt
gatgacgacaagaaactaccacaggttgaacatatattaccacttcttaaaagaggaatt
ggtattcatcactcgggattacttccaataattaaagaaacgattgaaattctttttggc
gaaggattaattaaagccttgtttgcaaccgaaacatttgcaatgggtctcaatatgccg
gcccgaactgtcgtctttacaaatgcccgaaaatttgacggaacagatttccgatggctt
acttcaggagaatacatacaaatgagtggacgtgccggtagaagaggtctggatgaaaga
ggaattgttattttgatgatcgacgagaagatgagtccatctgttggcaaagatttggtt
aaaggcgcttctgatccaatcaacagtgcctttcatttaacttataatatggttttgaat
ttacttcgagttgaagaagtaaatcccgaatatatgcttcaacacagcttttatcaattt
caacattactcacaatatccacaacttcaacaaaaattggaagaacttcagaaacagcac
aatgagatcaatgtttcagacgaacataatgttaccgaatatattaaacttaaagatcaa
gtgaatggtttatcgcaagactttcttcaatatataacaagtcctcgatatatacttcca
tttttgacttcgggacgtcttttaaagattaaatccaatgaagatttggatatgagttgg
ggagtcgttgtaaactataacaaaaaagttatcaaaaagagatctatgaatccggcgctc
gaagaatcgacattttatacgattgatattcttttaaatttagctaaaaatattgatcct
aaaactgatgccatatttccacctaatgatggagagaaaggagaaatgaaaatagtgacc
ataagtttaactaatattactcatataagttctctcagaatatttattcctcaagatctt
agaagtcttgacaacagacaatcggtttttaaatcaataactgaagtcaaaaaacgattt
acttctgaagacaaaaaagttaatattcctcttttagatccaatcgaagacatgaaaatt
agcgacaaagagttcaaaggaatagtcaagaagttagaaatatgtgaaaaaaggttaaca
ggattttgtaaaattgattcaaaagctgttgagttactcgagaagaaggctaagatatcc
gatgatattaaaaaagttcgacaaaacttgaaaaaagctcaaagtttactacaaatgaat
gaattgaaatgcagaaaaagagtcataagaagacttggctattgtacggctgccgatgtc
attgaaattaaaggtcgggtcgcgtgtgagataaccagtggcgatgaattactattgaca
gaaatgttatttaatggtgtatttaatgatcttaatgttcaccaaatttctgcactcttg
agttgttttgtatttgaagagaagacacaacaattaccaaagttgacggaagagttagcc
aaaccattgcgaacaatgcaagagttggcaaaacgtatcgcaacggtttcaattgaagcc
aaactagatttagatgaaaatgcttacattgaaaaatttaagcccaacttaatggatgtc
atctattggtggaccaaaggcgccacttttgcacagttatgtaaaatgaccgacgctttc
gagggttcaatcattcgatgtatgagaagattagaagagttattgcgccaaatgtgtcaa
tcggctaaagttatcggaaatactgatctcgaaaataagttttctgaagcaatcaaatta
attaagagagacattgtatttgctgccagtctttatctgtaa
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