KEGG   Ostrinia nubilalis (European corn borer): 135072021
Entry
135072021         CDS       T10851                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
onu  Ostrinia nubilalis (European corn borer)
Pathway
onu03013  Nucleocytoplasmic transport
onu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135072021
  09122 Translation
   03013 Nucleocytoplasmic transport
    135072021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onu03019]
    135072021
   03041 Spliceosome [BR:onu03041]
    135072021
Messenger RNA biogenesis [BR:onu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     135072021
Spliceosome [BR:onu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    135072021
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40 WDR55 Beta-prop_NOL10_N Beta-prop_WDR3_2nd DSE1_N WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_ACSF4 EIF3I Beta-prop_EIPR1 TRM82_WD Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_KIB1-4 Beta-prop_TEP1_C CFAP251_N Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_RIG_1st PQQ_2 Beta-prop_IFT140_1st WD40_like Beta-prop_WDR36-Utp21_2nd Beta-prop_NUP159_NUP214 DUF8788
Other DBs
NCBI-GeneID: 135072021
NCBI-ProteinID: XP_063822014
LinkDB
Position
5:15341971..15343969
AA seq 325 aa
MLDKILYNTILGQTFSPCGKYLVAGNIYGQLAVFDLDRILNPVVELLTTDYNQPKHIHSL
DSGHQICSLATTEKFLIVGSVNLIYGWDWKGVLGAKLSKPSWVIKIPSQSALEQIDVNSL
WVSDDEGKLYAGCGDNKLYVFNLENGQQTSVMTGHTDYIHSVHGKNNQLVTAGEDGDVLI
WDVRTGKSHNKLNPHSNSKVSRPDIGKWVGSAALGDDWIVCGGGPRLSLWHLRSLDAVTV
FDLPDHGIHVSYFHDDCIVAGGTAKHLYQLNYSGEIKVELPVSATTVYSAVLRTSPNKVL
AIAGSSPEIDLCTTFNYRDQILHFR
NT seq 978 nt   +upstreamnt  +downstreamnt
atgctggataaaatattatacaatacaattctcggccaaacattttctccttgtgggaaa
tatttagtcgccggcaatatctatggacaactggcagtttttgatcttgatcgaatattg
aatcctgtagtcgaattgcttacgacggattacaatcagcccaaacacatacatagtctt
gattcaggccatcagatatgcagtttagctactacagaaaagtttctgatcgttggatct
gttaatttgatatacggatgggactggaagggtgttttgggtgcaaagctgagcaaacca
tcatgggtgatcaaaataccatctcagtctgcgttggaacagatagatgtcaatagcctc
tgggtgtctgacgatgaagggaagctgtatgcaggttgtggcgacaataaactgtatgtt
tttaatctggagaatggacagcaaacctcagttatgactggacacactgattacatacac
tcagttcatggaaagaacaaccagctagtcactgcaggcgaggatggtgatgtcctcata
tgggatgtaagaacaggcaagtcccataacaagttgaatccccacagcaacagtaaagtc
agccgtccagacattggcaagtgggtcggttctgcagccctaggagatgactggattgtt
tgtggtggaggccctcgcctgtctctatggcacctacgctcactagacgccgtcacagta
ttcgacctacctgaccatggcatccatgtgtcctacttccacgatgattgtatagtagca
ggaggcacagccaagcatttgtaccagttgaactattccggagaaatcaaagttgaacta
ccagtgtcggctactacagtctattctgcagtgttgaggacgagccccaataaagtactg
gctatcgcaggctcaagccccgaaatcgatttgtgcacaacattcaactacagagatcaa
atattacattttcggtaa

DBGET integrated database retrieval system