Ostrinia nubilalis (European corn borer): 135075096
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Entry
135075096 CDS
T10851
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03440
Homologous recombination
onu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135075096
03450 Non-homologous end-joining
135075096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
onu03032
]
135075096
03400 DNA repair and recombination proteins [BR:
onu03400
]
135075096
DNA replication proteins [BR:
onu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
135075096
DNA repair and recombination proteins [BR:
onu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
135075096
BRCA1-C complex
135075096
NHEJ (non-homologous end-joining)
MRX complex
135075096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_15
AAA_21
AAA_29
AAA_16
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
135075096
NCBI-ProteinID:
XP_063825503
LinkDB
All DBs
Position
10:complement(7273392..7280593)
Genome browser
AA seq
1304 aa
AA seq
DB search
MAGVKSLAVRGIRSFGPEDGDEQRITFEKPLTLILGQNGCGKTTIIECLRYAITGQMPPG
SRNECFVHDAKVNGTNEVLAQVRLKIVNAKDKQLEVSRSMRVTALQKKKTKFQTLDSFLS
VLDDAGKTKDISSRCADLDFVMYEELGVSKAILNSVIFCHQEDSSWPLDEGKKVKERFDE
IFEADRYSDCFERLKKIRKEYTQNLKLLEQEVAHLTEKKEDLDKKKLDVINTETRISEAE
LKVAELTQELKPISEKLSAITTLENNIVAFEAKKEKIKNKLEHNRTQEEELKKAIKNIFE
GTTAELQENISNYGATAKAKQKELNDSYKKNFGFNKEEEKIADEKTKNEMKVSKLILLES
QNQEKIEKRNKLVVETAQIAEIEGVTEVATDEDAEKGVEKITEKVDALKKDLNEHKKVVD
ADESKLQLTVDESRDALSRHKQKISNKESDIQKNKKDIAKVDKEITDANESKVKLENLEK
KIESAEEEYKQLQSELNTEECQQEITEDEKVMETYETELDELSEKITKLQKQSAKLKERD
LVEESLKTKEKQAAVLRNKHKAALTDILGSMPEKDFALSVNKFECEIRAEVDSMKKKQKE
KHTQQTALQTERKHVREMLTDKRSELTKAEDQMYKACGTQSYESTLAKVTSNVEKLQDEQ
NVLQSSIFIIGKYKGQLQDNNCCPLCSRGFDNESEVTDLISQLTTQVMNVPAKLEKVTED
LQKASAKKDELLSMKSLNEKISTLKEKDIPQLEKRLTDIEQQIATLTQETEELSMALIEP
ETKMQTAKQIHSDMPLLDRTTQEIATITKNLEAVKAQCADFETDMTLDGALAKQTDLKQK
ISSLKNKIKTTQRKLNAHNKKLQTMTEKKNKLKEQLLNLQKKVQEIFNLQEKKKQLEEDG
EKFVQELKELQDGIPALEEVVKEKEAAKSEQMSKLRSVTETKNSYILKVTSSFDKVKQIN
LEIKQHKDKNIPLEMDKIKEANEKLMEKQKQIMADRDALTKRIDTLKDELAKQEIYKRDL
EDNMKMRKAQTEIENLLKEETENNEKMNGANMEMLTEKPALITQQTKLFREKAQNEGVLS
ELKDRLKQCRLELKKTLNKDIENRFREKFYELHVTKAIDKDIKDYSIALEKCVMEFHREK
MESINLIIRELWRKIYRGNDIDYIEIKTEGGMTAESDRRKYDYRVVQCKNGVEIDMRGRC
SAGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDQENITSLCSALGEIVKERMVQKN
FMFIIITHDKEFIESLGNIDKVSHYYEVSRNEHGKSRIKRIRFA
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggccggggtgaaatctttggcggtcaggggcataagaagttttggtccagaggacggc
gatgaacaaaggataacgttcgaaaaaccactaacattaatcctaggacaaaatggttgt
ggtaaaacaactatcatcgaatgtttacgatacgctatcaccgggcaaatgccgccggga
agccgtaatgagtgttttgttcatgacgctaaagtcaatggaaccaacgaagtattggcc
caagtcagactgaagattgtcaatgcaaaggacaagcagctagaggtgtctaggtctatg
cgtgtcaccgcactacagaagaagaagacaaagtttcagactttggattcatttctgtct
gtgcttgatgatgctggaaaaactaaagacatttcatcgagatgtgccgatttagatttt
gtcatgtatgaagaacttggggtatccaaggctattcttaattcagttatattctgtcac
caagaagactcaagttggcctttggatgaaggtaaaaaagtaaaggagcgatttgatgag
atttttgaagctgacagatacagtgactgttttgaacgtctcaaaaagataagaaaggaa
tacacacaaaacttaaaacttcttgaacaagaagtggctcacttgactgagaagaaggaa
gacttggataagaagaagttggatgtcattaacactgaaactcgcatatctgaagctgag
ctaaaggtggctgaattaacacaagaattgaaacccatctctgaaaaactgtctgcaatc
actactcttgagaataatattgtagcatttgaagcaaagaaggagaaaatcaaaaataag
cttgagcacaaccgaactcaagaagaggaattaaaaaaagccattaaaaacatctttgaa
ggaacaacagctgagctgcaggaaaatataagcaactatggagctactgcaaaggctaaa
caaaaggaacttaacgactcatacaagaagaacttcggcttcaacaaagaagaagagaaa
attgcagatgaaaaaactaaaaatgaaatgaaagtcagcaagttaattcttctagaaagt
cagaatcaagaaaagattgaaaagagaaacaaacttgttgttgaaacagctcaaatagca
gaaatagaaggtgttactgaagttgcaacagatgaagatgctgagaaaggtgttgaaaaa
ataactgaaaaagttgatgctctaaagaaagacctcaatgaacataaaaaggttgttgac
gccgatgaaagcaaattacagttaactgttgacgaaagcagagatgcgctttcgcgacac
aaacaaaaaatatccaacaaggaatcagatatccaaaaaaacaaaaaggatattgccaaa
gttgataaagaaattactgatgccaatgaatctaaagtgaaattggagaacttggaaaaa
aagattgaatctgcagaggaagaatacaaacagcttcagagtgagctcaatactgaagag
tgtcaacaagagatcactgaggatgagaaagtaatggagacttatgaaactgaactcgat
gagctatctgaaaagataactaagctccaaaagcaaagtgctaagttaaaggaaagagat
ctggttgaagagtctttgaaaactaaagagaagcaggcagctgtgttaaggaacaaacat
aaagcagcactcacagatatcttgggcagcatgcctgaaaaggactttgcactttctgta
aataagtttgagtgtgagattcgagctgaagtggactcaatgaaaaagaaacagaaggag
aaacacacacaacagactgctctgcagactgagaggaaacatgttagggaaatgctaact
gacaaacgcagtgagctgacgaaagctgaagaccagatgtacaaagcttgtggaactcag
tcttatgagtcaacacttgctaaagttacctctaatgtggaaaaattgcaggatgaacaa
aatgttcttcaatcatccatcttcatcattggaaaatataaaggtcaactgcaagataat
aactgctgtcccttgtgtagtcgaggatttgataatgaatctgaagtaacagatttaata
tcgcaactgactactcaagtcatgaatgtgccagcaaagttggagaaagtcacagaagat
ttgcagaaagcctcagctaagaaagacgagttgctgagcatgaagtctttaaacgaaaag
atatctacattgaaagaaaaagatatcccccaacttgaaaagaggttgactgatattgag
cagcaaattgctacattgactcaagaaacagaagagttgtcaatggcgcttatcgagccc
gaaacaaagatgcagactgctaagcaaatccacagtgatatgccgctgctcgaccgcacc
acgcaggagatcgctaccattacgaaaaacctagaagcagttaaagcgcagtgcgccgac
ttcgagacggacatgactttggatggtgcgttggcaaaacagactgatttgaaacaaaaa
atcagctccctcaaaaataaaatcaaaactactcaaaggaaactcaatgcccataacaag
aagctgcaaacaatgactgagaagaaaaataagctgaaggaacagttgttgaatttgcaa
aagaaggttcaagaaatattcaatcttcaagagaaaaagaagcaattggaagaagatggc
gagaaatttgtccaagagcttaaggagctgcaagacggcattccggcattggaagaagtg
gtgaaggaaaaggaagcagccaagagtgagcaaatgagcaagttaaggagtgtaacagaa
actaaaaacagttacatacttaaagttactagttcatttgacaaagtaaagcaaattaat
ctggagattaaacagcacaaagataagaacattcctttggaaatggataaaatcaaggaa
gctaatgaaaagctgatggagaagcaaaagcagattatggctgatagggatgctcttact
aaaagaattgataccttgaaagatgagttggctaaacaagagatctacaagagggatttg
gaagacaacatgaaaatgcgcaaagcacaaacagaaatcgaaaaccttttgaaagaggaa
actgagaacaacgaaaaaatgaatggcgccaatatggaaatgctaactgaaaagcctgcc
ctaatcacgcagcaaactaaactgttcagggaaaaggcccaaaatgaaggagttttgagt
gaactcaaggatagattaaaacaatgtcgcttagaattgaagaaaactttgaacaaagac
atagagaacagattccgggaaaagttctatgaactgcatgtcactaaagccatagacaag
gacatcaaagactattctattgctctagagaagtgcgtcatggaattccatagagagaag
atggagagcataaacctaattatcagagagttatggagaaagatttacaggggcaatgat
attgattacatcgaaattaaaactgaaggaggcatgacggcagaatcagaccgtcgcaaa
tacgattacagagtggtacagtgcaagaatggtgtcgaaattgacatgcgcggaagatgc
agtgctggtcagaaagtgttagcctgccttatcataaggctcgctctcgcagagacattc
agctccagatttggtattttggctttggatgaaccaactaccaacctggatcaggaaaat
ataacgagtctttgttcggctctcggagaaatagtgaaggagcgaatggttcagaagaac
ttcatgtttatcatcataacacacgacaaggagtttatcgagtctctcggaaacatcgac
aaagtgtcccattactatgaagtgtccagaaacgaacatggaaagtctagaattaagaga
attagatttgcgtag
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integrated database retrieval system
