Ostrinia nubilalis (European corn borer): 135075277
Help
Entry
135075277 CDS
T10851
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
onu Ostrinia nubilalis (European corn borer)
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onu03021
]
135075277
03036 Chromosome and associated proteins [BR:
onu03036
]
135075277
Transcription machinery [BR:
onu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135075277
Chromosome and associated proteins [BR:
onu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135075277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
HHH_9
Spt6_S1
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
135075277
NCBI-ProteinID:
XP_063825729
LinkDB
All DBs
Position
10:12184009..12203385
Genome browser
AA seq
1719 aa
AA seq
DB search
MADFFDSEAEESGLSEDDEQPTERKKVKRKAQVQSDDEDEDEEDDEDRLREELKDLIDDA
PIDESGSDGEDSDEGPTKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLED
DDSDNEGADDPDLEREVIAEKLFVGGSDEEDENRSEAAAHHQQAQAEYDDDNEDMESDAD
DFIVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGDEDYEDEDEEDLD
EYIEDEEDDGERRRTKKGKPKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKLDVPERMQI
REVPITAVEEGSTELEDEAEWIYKQAFLKAPVSKADSQEARERSRRGSSTITKIRQALDF
MRNQTLEVPFIAFYRKEYVQPELNINDLWKVYKYDAKWCQLKQRKENLLKLLENMREYQL
DKVMENPDAPIPDTMRLIRDEDIERLKNVQTSEELRDVHTHFLLYYSHDLPEMQKVQRVK
EKKRELEEKKKMAREEAEKNGEDPEEAAAEVEARASEEEDHPCDVKYAVRSGPYELCRKA
GIEPLVKKFGLTPEQFAENVRDNYQRHEVEQQPVAPLEAAAPYALATGSAAEVVRRAVYM
CGVQLAREPLLRSTLRDALRERATLTVRPTARGMKEIDENHPCFGLKYLKKKPVRDLTGD
QYLKLTMAVEDKLLEVSISEQIEGNTGPSYLEELKQLYQKDEFAATVQAWNDLRVEAVTI
ALTKIVMPELRRELHSVLLQESKEYVLKCCRRRLYDWLKVAPYESRISDDDDEEWDTANG
LRVLSIAYVPDRAHSAFACVVAAAGEVVDHLRLPHLLYRRNAWDALERKNKEADMTALRR
FILRKKPHVIVIGGESRDALTVKADVSECVQRLVEDEQIPRIPIEIADNHISKIYSNSIR
GRNDFREYPDTLRQAVCQGRLLQDPLMEISQLCGPDEEILCLRYHPLQDQISKEDLLEGI
ELEFVNRVNEVGVDMNEAILTGRGTELLQYVCGLGPRKAQALIKLFKQTNQKLENRTQLV
TVCHMGPKVFINCSGFIKIDTSSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYED
EDANPAGAVEEILEAPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNSRYKDLRVP
YRSATPEELFDILTKESPETFYLGKMVLASVIGITHRKPQREMLDQANPVRNDETGLWEC
PFCHKNDFPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVADPTERVR
IGQTVHCRIIKIDVERFSVDCSSKSSDLLDKNKEWRPPKDPYYDQEAEDKDIRKEKDAKQ
TKERMQYVKRVIVHPAFHNISFAEAEKLMENMAQGEVIVRPSSKGSDHLTVTWKVADGIC
QHIDVREEGKENAFSLGRSLWIQGSEFEDLDEIIARHVTPMAGHARDLISYKYYRPLGGM
RDKAEEVLKEEKAKNANKIHYVISAAKNHPGRFLLSYLPRARCTHEYVSVTPDGYKFRQR
MFDSLGGLLKWFKEHFRDPPPSGTPLQRTPALRTPHASTIYHTPHAHTPAFHTPAHTPGP
AYINTPYTPSAQTPYMTPFAATPRQPDFLTPAAPRHKPIAVPVQMQQQMQPIYTEPADWQ
KAAEDWVRHRTRDTPATPRGSEGGATPRHVRSTPRHDARSTPRHDARSTPRHDVRGTPHS
HHSHSGRSSRAASARSTPHTNTSPRSMSLGDATPLYDEN
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttcttcgactctgaggccgaggagagtggattgtctgaagatgacgagcag
cccacagagcgtaagaaggttaagcgcaaagcacaagttcagagtgacgacgaagatgaa
gacgaagaagacgatgaggaccgtctgcgtgaggagctaaaagacttgatagatgatgct
cctatagatgaatcaggtagtgacggagaagattctgatgaaggtcctacaaagaaacgg
aaaaagagtgatgatgaacttgacgaccggttagaagatgaagattatgatctcattgaa
gagaatcttggtgttaaagttgcaaggaataaatttaaacgtcttcgacgtttggaagac
gatgacagtgacaatgagggggccgatgacccggatctagagagagaggttattgcagaa
aaactctttgtcggaggatctgatgaggaggatgagaatcgttcagaagcagcagcccac
caccagcaagcgcaagcggagtacgatgatgacaatgaggacatggaatcggacgccgat
gactttattgtggatgatgatggcagaccaatcgctgagcggaagaagaaacgtaaaccg
atcttcactgatgcatccctccaagaaggtcaggacatattcggtgtggactttgactat
gatgagtttgagaagtatggtgatgaagattatgaggatgaggatgaagaggacctggac
gagtacattgaggatgaggaagatgatggtgaacgaaggagaactaaaaagggtaaacca
aagcgtcccagcaagaagtctatatttgaaatatatgaaccgagcgagttgaagagaagc
cacttcactgatctggataatgagatccgcaaactggacgttcccgagagaatgcagatt
cgggaggtcccgattacggcggttgaggaaggcagcactgagctggaagatgaagccgag
tggatatacaagcaggccttcctcaaggctcccgtgtccaaggctgactcgcaggaggct
agggagaggtcacgcaggggctcaagtacgataacgaagatccgtcaagcgctggacttc
atgcgcaaccagaccttagaggtgccgttcatagcgttctaccgcaaggagtacgtgcag
cccgagttaaatataaacgacctgtggaaggtctacaagtatgatgctaagtggtgccaa
ttaaagcaacgcaaggagaaccttctcaaactcttggagaacatgcgggagtaccagctc
gataaggtgatggagaaccctgacgctcccataccggacaccatgaggctcatcagggac
gaggacattgagagactaaagaacgtccaaacgtcggaggagcttcgtgacgtgcacaca
catttcctgctgtactattcgcacgacctgcccgagatgcagaaggtgcagcgagttaaa
gagaagaagagagaacttgaggagaagaagaaaatggcccgcgaagaagccgagaagaac
ggcgaggatcccgaggaggcggctgccgaagtagaggcgcgggcttccgaggaggaagac
catccttgtgacgtcaaatacgccgtgcgctccgggccttacgagctatgcaggaaggcc
ggcattgagccgctggtgaagaagttcggcctgacgccggagcagttcgcggagaacgtg
cgcgacaactaccagcgccacgaggtcgagcagcagcccgtcgcgcccttggaggctgct
gcgccctacgccctggccacaggctcggcagcggaggtggtgcggcgcgccgtatacatg
tgtggcgtgcagttagcacgcgagcctttattacggagcacgctccgagatgcgctgaga
gagcgagccacgctgactgtgcgacccacggcgcgtggcatgaaggagatcgacgagaac
catccatgctttggcttgaaatacctgaagaaaaagccagtccgcgacctgaccggcgac
cagtatctcaagctgacgatggcggtggaagacaagcttctggaggtttccatcagcgag
cagatcgaggggaacaccggccccagctaccttgaggagctgaagcagctgtaccagaag
gacgagtttgcagccacggtgcaggcgtggaacgaccttcgcgtggaggcggtgaccata
gcgctgaccaagatcgtcatgcccgagctccgcagggagctacactcggtcctgttgcag
gagtccaaggagtatgtgctcaagtgttgccgtcgccgcttatacgactggctgaaagtg
gctccgtacgagtcgagaatatcggacgatgatgacgaagaatgggataccgcaaacgga
ttgcgcgtgctatcaatagcatacgtcccggaccgcgctcactcggccttcgcgtgcgtg
gtggcggctgccggcgaggtggtcgaccacctgcgcctgccgcacctgctgtaccgccgc
aacgcctgggacgcgctcgagcgcaagaacaaggaggccgacatgaccgcgctccggagg
ttcatcctccgcaagaagcctcacgtgatcgtgatcggcggggagtcccgcgacgctctc
accgtgaaggccgacgtgtcggagtgcgtgcagcgcctggtggaagacgagcaaatcccg
cggatccccatcgagatcgcggataaccacatcagcaagatctacagcaatagcattcgc
ggccggaacgacttcagagaataccccgatacactccgtcaagctgtatgccaaggtcgt
ctcctccaagatccgcttatggaaatctcacagctctgtggccccgacgaggaaatactt
tgcttgcggtaccacccgctccaggaccagatatccaaagaggatctgttagaaggcatc
gagctggaattcgtgaatcgagtgaacgaagtcggtgtagacatgaatgaagccattctg
acaggccgaggcacagagttactccaatacgtctgcggtctaggtccaaggaaagctcaa
gccttaatcaagctcttcaaacagaccaatcagaagctagaaaacagaacgcagttagtt
acagtttgccacatgggtccaaaggtgttcatcaattgctcaggttttataaagattgat
acgagcagtttaggagatagtacggaggcatacatcgaagtgttggacgggtcgcgtgtt
cacccggaaacttatgaatgggcgaggaaaatggctgtggacgctttggaatacgaagac
gaggatgccaatccagcgggggccgtagaggaaatcctcgaagcgcccgaaaggctaaag
gatttagatctcgacgccttcgccgaagaattggagcgccaaggcttcggaaacaaatgt
atcacgctgtacgatatccgagctgaattgaactctaggtataaagacctcagggttccg
tatcgctcggcgactcccgaggagttgttcgatatactgaccaaagagtctccagagacg
ttttacttaggcaagatggtgctggcttcggtgatcggcatcacgcatagaaagcctcaa
agagagatgctggaccaggccaaccctgtgaggaacgacgagactggactctgggagtgc
cccttctgtcacaagaatgacttccctgagttatctgaggtatggaaccacttcgacgcg
ggcgcgtgtccgggccaagcgaccggcgtccggatccggctggacaacgggctgtccggg
tacatccacatcaagaacctgtccgaccggcacgtggcggaccccacggagcgcgtccgg
atcggacagacggtgcactgccggatcatcaagatcgatgtggagaggttctcggtggac
tgctcgtctaagtcttcggacttgttggataaaaataaagagtggagaccgccaaaagac
ccgtactacgaccaagaggcagaggacaaagacatccgcaaagaaaaggatgcaaagcaa
actaaagaacggatgcagtatgtcaagcgggtgatcgtgcatcctgctttccacaacata
tccttcgccgaggcagagaagcttatggagaatatggcgcaaggagaggtcattgtcagg
ccgagcagtaagggctccgatcacttgacagtaacgtggaaggtggctgacggcatctgc
caacacatcgacgtccgcgaggagggcaaagaaaacgcgttttcattaggacgaagtctc
tggatacagggatccgagttcgaggatctcgacgaaatcatcgcgcgccacgtgacgccg
atggcgggccacgcgcgcgatctcatctcctacaagtactaccggccgctcggaggcatg
cgtgacaaggccgaagaagtgctcaaagaagaaaaggccaagaacgccaacaagattcat
tatgtcatatccgcggcgaagaatcaccccggccggtttttgctatcgtatctcccgcgg
gcgaggtgtactcacgagtatgtgtccgtcacgcccgacggctacaagttcaggcagcgg
atgtttgattctcttggcgggttgctcaaatggtttaaagagcacttcagagatccgcca
ccgagcgggacgcctctacagcgtacgccggcgttacgtactccgcacgcgtccacgata
taccacacgccgcatgctcatacgccggctttccatacgccggctcacacgccgggcccg
gcgtatatcaatacgccttatacgccgtcggcgcaaacgccgtacatgacgccgttcgcc
gccacgccgcgacagcctgacttcctcacgccagctgcgccgcgacacaagcctattgcc
gtgcccgtgcagatgcagcagcaaatgcagcctatttacacagaaccagccgactggcag
aaggcggccgaagactgggtgcggcaccgcactcgcgacacgcccgccacgccgcgcggc
agcgagggcggcgccacgccccgccacgtccgctctacgccgcgacacgacgcgcgctcc
acgccacgacacgacgcccgctcgactccacgacacgacgtccgcggcacgccgcactcg
caccactcgcactcgggccggtcgtcgcgcgcggcgtcggcgcgctccacgccacacacc
aatacctcgccgcgctccatgtcgctgggcgacgcgacgccgctctacgacgagaactag
DBGET
integrated database retrieval system
