Ostrinia nubilalis (European corn borer): 135076206
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Entry
135076206 CDS
T10851
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135076206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onu03400
]
135076206
DNA repair and recombination proteins [BR:
onu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135076206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
MnmE_helical
Motif
Other DBs
NCBI-GeneID:
135076206
NCBI-ProteinID:
XP_063826755
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Position
11:8314016..8338614
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AA seq
926 aa
AA seq
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MKTILAMCNHYLLMFKFVSHISDSIQQQAFIKYFHSLPEKPPTTVRIFDRNDYYSVHGVD
AHTSAREVFSSISNIKKMGIEPNRLDYLVLSKGNFEILIKKLLLVRRYRVEIYVAEGSVK
NSDWVLKYKGSPGCLSQLEEVLGEGLGGSDENTPCLMAVNIKTDAVSKGRLLGVACITAG
DYQMSVTEFTDDDLLTELETITVQMAPSECLVPQAENDDYKMLKQVMARANVTVTKLKKS
EFSTEGLHQDLNRLLKFKDDQQQDCNAFPETRKETAMTCLAAAIKYIALLNDSTNFARFR
LTTIQADCFLHLDAAALSALNVFPELGDTSHAPSRSLLGLLDRCRTQQGKRLLAQWLRQP
LRDINLINERLDIVELLVRSSQLRLQLYEDHLRRIPDLQALARRLSRKKANLHDCYRIYQ
AINRLPALLQCLAEADNSTVHSSLSEPISELNDDLNKYQQMIEATMDMEAVERGDFLVKP
SFDENLQSLGEQLEQLQSSADKELNKAARDLGLDAGKTVKLETNPQGGFCFRVTLKEEQT
LRGNKKYTIIDAVKGGVRFKTNNLENISEEYVHTKSSYEKEQDKVVAEIVGIAAGYSECL
FCLSHILARLDVLVSFAVAASTAPYPYCRPVLTESLDELVLKDVRHPCLEVQEGVSYIPN
DVVFKRGECIMHIVTGANMGGKSTWMRSCGVSILMAHAGCLLPAAAATIPRLRALAARVG
AADREDKGQSTFMLEMIESAAILRTATPDSLVLVDELGRGTSTYEGCGIAWAIAEELATK
CQCFCLFATHYHELTRLPAALPGRVVNSHAEAAVADQQLILLHKIAPGPATHSLGLHVAR
LADLPDSIIEYAEEKQAQLETNMFEAETSVKSQEVSEGQNLIQEFLKKCKRLEESTPSDD
TLAEAIGKLKHDLMQQNNKYVQSIMA
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatattagccatgtgtaatcattacctattaatgtttaagtttgtttctcac
atttcagattccattcaacagcaggcatttataaaatacttccattcattacctgaaaaa
ccaccgacaacagttcgcatcttcgaccgcaatgactattacagcgtccacggcgtggat
gcccacacttcagccagggaggtgttctcttccatatcgaacatcaagaaaatgggcatc
gaacccaaccggctggattacctggtgctctccaaaggaaacttcgagattctcatcaag
aaattgttgctggtaaggcgttaccgagtggagatatacgtcgcagagggttcagtgaag
aacagcgattgggtgctgaaatacaaaggctctcctggatgtctctcacagttggaggag
gttctaggggaaggactgggaggatcagacgagaatacgccctgcctcatggctgttaat
ataaagacggatgctgtgagcaaaggtcgtctcctcggtgtagcgtgcattacggctggt
gactaccaaatgtcagtgacggagttcacagatgacgatttactgacggaattggagaca
attactgtccagatggccccttcagaatgcctggtgccgcaggcagaaaatgacgactac
aaaatgttgaagcaagtgatggccagagcaaatgtaaccgtaacaaaactgaagaagagt
gaattttcaactgaaggcctgcaccaagacctgaaccgattattaaaattcaaagatgac
cagcagcaggactgtaatgccttcccagaaacgaggaaagagactgccatgacctgtttg
gcagctgcgataaaatatattgcactgttgaatgacagcactaatttcgcaagattccgc
ctgaccacaatccaagcggattgcttcctgcacttagacgcggccgcgttgtccgctcta
aacgtgttcccagagttgggcgatacgtcccacgcgccgtcccgaagcctgctgggactg
ttagataggtgcagaactcagcaggggaagcgactcctcgcccaatggctgcgccagccg
ctccgcgatataaacctgatcaacgagcgtcttgacatagtggaactgctagtgcgtagt
tctcagctccgcttgcagctgtatgaagaccacctgcgaaggattccggacttgcaagcg
ctggccaggcggctctcgaggaagaaggccaatctgcacgactgctataggatctatcag
gccataaacaggctgccggcacttctgcagtgcctagcggaggcagacaactcgacggta
cactcttcactgtccgagcccatatcagaactgaacgacgaccttaacaaataccagcag
atgatcgaggctactatggacatggaagcagttgaaagaggcgatttcctggtgaaacca
tctttcgatgaaaatctccaaagtctcggcgaacagttagaacagcttcagtcttcagct
gacaaagaattgaacaaagcggcaagggacctcggcttagacgctggaaagaccgtaaaa
ctagaaacgaacccacagggaggcttctgttttagagtgacactaaaagaggaacaaacg
cttcgtggaaacaaaaaatacacgataatcgacgctgtgaaaggaggcgtcaggtttaag
accaataatttggaaaacatctctgaagaatatgttcatacaaagtcttcatatgaaaaa
gaacaagataaagtagttgctgaaatcgtcggaattgcagctggctattccgaatgcctg
ttctgtttatcccacatcctggcccgtttagacgtgttggtatccttcgccgtggcagca
tccaccgcgccctacccgtactgccggccggtgctaacagagagcctggacgaactggtg
ctgaaggatgtcagacatccgtgccttgaggtgcaggaaggagtgtcttatattcccaat
gacgtggtctttaaacgaggcgagtgcataatgcacatagtgacaggagccaacatgggc
ggcaagtcgacctggatgcgctcctgcggcgtttccatcctcatggcgcacgcgggctgc
ctcctaccggccgccgccgccacgatcccgcgcctgagggcactcgcggcccgcgtgggc
gccgccgacagggaggacaagggacagagcaccttcatgctggagatgatcgagtccgcc
gccatcctgcggacagcgacgccggattccttggtcctcgtcgatgaactaggccgtggc
acatctacctacgagggatgtggaattgcctgggctatagcagaggagctagccacaaag
tgccaatgcttctgcctgttcgcgacccactaccacgagctgacgcgactccccgcggcg
ctgcccggccgcgtcgtcaactcgcacgccgaggccgccgtagctgatcagcaactgatc
ctgctgcacaagatagcgccggggcccgctacgcactcgctgggactccacgtggctagg
cttgctgacctcccagactctatcattgagtatgctgaagagaagcaagctcagctcgaa
acgaacatgtttgaagctgaaacttctgttaaatcccaagaggtttcagaaggtcagaat
ctcatacaagaatttttgaagaaatgcaaacgtttagaagagtcgacgccgtcagacgac
acccttgcagaagcgatagggaaactgaagcacgacttgatgcaacaaaacaacaagtac
gtccagtccataatggcgtaa
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