Ostrinia nubilalis (European corn borer): 135076901
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Entry
135076901 CDS
T10851
Name
(RefSeq) ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
onu Ostrinia nubilalis (European corn borer)
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onu03041
]
135076901
03009 Ribosome biogenesis [BR:
onu03009
]
135076901
Enzymes [BR:
onu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135076901
Spliceosome [BR:
onu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135076901
Ribosome biogenesis [BR:
onu03009
]
Eukaryotic type
90S particles
Helicases
135076901
Pre-60S particles
135076901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CMS1
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
135076901
NCBI-ProteinID:
XP_063827482
LinkDB
All DBs
Position
12:8702350..8713108
Genome browser
AA seq
471 aa
AA seq
DB search
MNVEEILTKSSFSMLKNKIDNRILSALKNMGLEKPTRIQAETLPHLLSNEDIIGAAKTGS
GKTLAFLIPVIDKLVKLGFSRKHGVGCIILSPTRELALQTHQVLKKVLTNIDLSCCLIVG
GEKKAKDILSLKKGVNIIVSTPGRLLDHLQNTENFNCNNLKCLVVDEADKLLEAGFEKEI
TGIIKLLPSKRQTILFSATIDSNVKNLARLAMKNDPIIVSTNDEKQSTVAGLQQGYCVCP
VESRIPWLYKMLKKGRKLKTMVFFSSCKSVDFHYEFFNLHCKASVLSIHGRQSQARRKEA
YQSFVDAQNGALFCTDVAARGLDIPSVDWIVQYDPPTDPKEYIHRVGRTARGLNNKGNAV
ILLRPEEEDFVNYLKEEKVYLDKYSFGDPPGDVQEMLEDLVSTNGVVKTLARKAYLSFLR
CYKTHPMKNIFNIKTLDLKLAAKAFGFLEQPHVDFLKSSKKHQKLDKPDPL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgaagaaatattaacgaaatccagcttttcgatgctgaaaaataaaattgat
aatcgaattttgagtgcattaaaaaatatgggtctagaaaaaccaacgcgaattcaagcc
gaaactctgccacatttactatcgaacgaagatatcattggtgctgctaaaactggaagt
ggaaaaactcttgcttttcttatcccagtcatcgataaactcgtaaaactgggattttcc
aggaaacacggtgtgggatgtataattttatctccgacaagagagttagcgttacagact
caccaagttctgaaaaaagtactcacaaacattgatttgtcttgttgtttgattgttggt
ggagagaagaaagccaaagatatcctgtctttaaagaaaggtgtcaacattatagtgagt
actccaggaagattactggatcatttacagaatactgaaaactttaactgcaacaatcta
aaatgcctagttgttgatgaagctgacaagttgttagaggctggttttgaaaaagaaatt
acaggaataataaagttgcttccaagtaaaagacaaacaatattatttagtgccacaata
gatagtaatgtgaaaaacctagcaaggttggctatgaagaatgatccaataattgtttct
accaatgatgaaaaacaatccacagtggctggtcttcaacaaggatattgtgtttgtcca
gtagaaagccgaataccctggctgtataagatgctcaagaagggacggaaactgaaaaca
atggtttttttttcatcgtgcaaatcagttgatttccattacgaatttttcaacctgcat
tgcaaggcgtcggtgttaagtatacatgggagacaaagccaggcgcgaagaaaagaagca
taccaaagttttgtggatgcccaaaatggcgcactgttttgcacggacgtggccgcaaga
gggctggacattcctagcgtagactggatagttcagtacgatcctcctacagatcctaag
gaatacatccacagagttgggaggaccgctagaggactaaacaataaaggaaacgcagtt
atactcctgagaccagaagaggaagattttgtaaattacctaaaagaggagaaagtgtat
ttggacaaatacagttttggcgatcccccgggagatgttcaagaaatgcttgaagattta
gtgtcaacaaacggagtggtaaaaacattagcaagaaaagcttacttatccttcttgcgg
tgttacaaaacgcatccaatgaagaatatattcaatatcaagacactggacttgaaacta
gctgccaaagcatttgggtttctggagcaaccgcacgtcgattttcttaaatcatcaaag
aaacatcaaaagctagataaaccagatccactttga
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