Ostrinia nubilalis (European corn borer): 135077238
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Entry
135077238 CDS
T10851
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135077238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onu03021
]
135077238
03019 Messenger RNA biogenesis [BR:
onu03019
]
135077238
Transcription machinery [BR:
onu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135077238
Messenger RNA biogenesis [BR:
onu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135077238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCCH_RBM22
zf-CCHC_2
Nab2-like_zf-CCCH_
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
135077238
NCBI-ProteinID:
XP_063827846
LinkDB
All DBs
Position
13:complement(15353186..15354902)
Genome browser
AA seq
290 aa
AA seq
DB search
MEVLVANVDHIKFDIDYALEEQYGALPLPFPGMDKSTAAVCEFFSQPGGCGNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLAGFCPDGRNCKFMHPRFELPAPPEQTK
DAKRLPVCHYCSEVGHKASTCNKIPIEQREAAQRQEEARYRALGYVKPVGENEDMNTQRL
QRSMHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSSQNQNNQGPVFKKPN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgctagttgcgaacgtggaccacatcaagtttgatatcgactacgctttggaa
gaacagtatggggcgcttccactgccgttccctggaatggacaaatcaacagcagcagta
tgcgagttcttcagtcagccgggcggctgcggcaacgggccgcagtgcccgtaccggcac
gtgcgcggtgatcggaccgtggtgtgcaagcactggctgcgaggcctctgcaagaagggc
gaccagtgcgagttccttcacgagtatgacatgtccaagatgcccgagtgctacttctac
gccagattcaacgcgtgccacaataaagagtgcccgtttcttcacatagaccctgagagc
aaaatcaaagactgcccttggtatgaccgaggtttctgcagacacggtcctcactgccgc
caccggcacgtgcgccgagtgctgtgcatgaactacctggccggcttctgtcccgacggc
cgcaactgtaaattcatgcatccacgcttcgagctgcctgctccgccagagcagaccaag
gatgccaagaggctgcccgtttgtcactactgttcagaagttggacacaaagcgtccact
tgcaacaaaatacccatagagcaaagagaagcagcgcagagacaagaagaggctagatac
cgtgcgcttggctacgttaagccagtcggtgaaaacgaagacatgaacactcaaagattg
cagcgctcaatgcataaaccacttgaagaggtgacatgtttcaagtgcggcaccaaaggt
cactatgcgaacaagtgtcctaaaggccacctggcctttctgtccagccaaaaccaaaat
aaccaagggccagttttcaaaaaacctaactag
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