Ostrinia nubilalis (European corn borer): 135077278
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Entry
135077278 CDS
T10851
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03013
Nucleocytoplasmic transport
onu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135077278
09122 Translation
03013 Nucleocytoplasmic transport
135077278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onu03019
]
135077278
03041 Spliceosome [BR:
onu03041
]
135077278
Messenger RNA biogenesis [BR:
onu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
135077278
Spliceosome [BR:
onu03041
]
Complex C
Other components
EJC/TREX
135077278
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
135077278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
135077278
NCBI-ProteinID:
XP_063827884
LinkDB
All DBs
Position
13:complement(3741390..3750220)
Genome browser
AA seq
722 aa
AA seq
DB search
MSEKLGFEELRAKYKDVLSKAFATNNIDLLDSFTKNTSEVDRKAAMDQAFRDKLLELLVE
EPNTLENYVCFCIESCRRQMVTPTMPVVLLGDIFDALTLNKCEKMFTYVENGVNIWKEEL
FFVACKNNLLRMCNDLLRRLSRSQNTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENVT
EFGGDSTSTLKDSLDEEMVVDTEQNKLNIDYNLYCRFWSLQDFFRNPNTCYNKIQWKTFV
AHSGSVLSAFSSYKLEAIELQKAKLNRLKTVGGDVEMSESSKEQHYFAKFLTNQKLLELQ
LSDSNFRRCVLIQFLILFQYLTCTVKFKMESQELKSEQLDWVKDTTSQVYKLLGETPPDG
TRFADCVKRILRREEHWNTWKNDGCPEFQKPKPPVQTDSSDDIKKAKKRRRPVGDIIKEY
EGQQKFFMGNNELTKLWNLCPDNLSACRTKERDFMPSLESYMLSGAGTGGKRTNCGGWGW
RALRLLARPSPHFLCLLYYCSSLESYMLSGAGTGGKRTNCGGWGWRALRLLARRSPHFFV
HTNNPIGRLPDYLDDMVDRVTREVAANAAAANSTNGDSSSLSSDKNAKQETQDSEEITEE
QMEADLIKEGDTNDIEQVPDSTHAGEDDYDKTARSKVTMINPTQLDAVSAKLVDWKKLAA
KLGYKPDEIQFFESENATDAARAKNMLQLWFDDDEDASVENLLYIMEGLKMADACEALRI
AK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaacttggctttgaagagcttcgagcaaaatataaagatgttctatccaaa
gcatttgccaccaataatattgacctgctggattccttcacaaaaaacaccagtgaagtg
gacaggaaagctgccatggatcaggcatttagagataagttattagaactgctggttgaa
gaacctaacactttagaaaactatgtctgtttctgtatagagtcgtgtagacggcagatg
gtaactcctacgatgccagtcgtcttgctgggagacatatttgatgccctcaccttgaac
aaatgtgagaagatgtttacttatgtagaaaatggtgtaaatatttggaaagaagaattg
ttctttgtagcatgtaagaataatctgctcagaatgtgcaatgacttattgagacgttta
tcgagatcccaaaacactgtcttttgtggtagaatcttgctattcttggcaaagtttttc
ccattctcggagcgctctggacttaatatagtgtccgaattcaaccttgaaaatgtgacg
gagtttgggggagatagtacaagtacacttaaagactcgctggacgaagaaatggttgtg
gacactgagcaaaacaaactgaacatagactacaacttgtattgtagattctggagtctg
caagatttcttcaggaacccaaatacttgttacaataaaatacagtggaaaacatttgtt
gcacattcaggcagtgttctctcagcattctcatcgtacaagttagaagctatcgaacta
cagaaggctaaactgaacagactgaagactgtaggtggtgacgtagaaatgtcagagtca
agcaaggaacaacattacttcgctaagttcctcaccaaccagaagctgttggaacttcag
ctgtccgactcgaacttccgaagatgtgttctgatacagttcctgatacttttccagtat
ttgacgtgtacagtaaagttcaaaatggagtcgcaagagctaaaaagtgaacagctggat
tgggtcaaagacacgacatcccaggtgtacaaactgctaggtgagacgccaccagacggc
actcgcttcgcggattgtgtcaaacgcatcctccgccgcgaggagcattggaacacctgg
aagaatgatggatgtccagagttccaaaaacccaaacctccagtccagactgactcatcg
gatgacatcaaaaaggcgaagaaacgtcgccgtccggtcggcgacattatcaaggagtat
gaagggcagcaaaaattctttatgggaaacaatgaacttacaaagctgtggaatctatgc
ccagataacttatccgcctgtcgcaccaaagaaagagacttcatgccgtcgttagaatcc
tacatgctaagtggagcgggcactggcggtaaacgaactaactgcggcgggtggggctgg
cgcgcgcttcgtctactggcgcgtccctcgccgcacttcttatgtttattgtactactgt
tcttccttagaatcctacatgctaagtggagcgggcactggcggtaaacgaactaactgc
ggcggatggggctggcgcgcgcttcgtctactggcgcgtcgctcgccgcacttcttcgtg
cacacaaacaaccctattggacgcctgcccgactacctggacgatatggtggaccgcgtg
acgcgagaagtggcagcgaatgccgcagcagcgaacagcaccaacggcgactcgtcaagt
ctctccagcgacaaaaatgccaagcaggagactcaggactcggaagaaattactgaagag
caaatggaggcggatctgatcaaagaaggagacactaatgatatcgaacaggtccccgac
tcaactcacgccggcgaagacgactacgacaaaaccgctcgctccaaagtgaccatgatc
aacccaacacaactagacgcggtttccgcaaaactcgttgactggaagaaactcgccgcc
aaactaggctataagcccgacgaaatacaattcttcgagtctgaaaacgctacagacgcg
gcaagagctaaaaatatgctacaactctggttcgacgatgatgaagacgcttctgtagag
aatctactgtatatcatggaaggtttaaagatggccgatgcgtgtgaagctttacggatc
gcgaaatga
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