Ostrinia nubilalis (European corn borer): 135077443
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Entry
135077443 CDS
T10851
Name
(RefSeq) collagen alpha-1(XV) chain-like isoform X1
KO
K06823
collagen type XVIII alpha
Organism
onu Ostrinia nubilalis (European corn borer)
Brite
Exosome [BR:
onu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135077443
Proteoglycans [BR:
onu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
135077443
Glycosaminoglycan binding proteins [BR:
onu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135077443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135077443
NCBI-ProteinID:
XP_063828054
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Position
13:5729337..5909677
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AA seq
1178 aa
AA seq
DB search
MDQRPQFSQTMKCLRYHWLLLPLLTTLCSANDGLFGSKFQSDVPEYDLLHAIGVPFSNPK
TQYFDEGLDGFPAYGLRPGSDIKSPYRLFMPEKLYPEFSITATVRPANKDGGFLFSVVNP
LETVVQLGVQLIPSGPGLTNISLLYTDANIYALSQTIASFVVPSFAKKWSRFAMRVTTDN
VTLFLNCHEFDTVAVKRNPMELVFDSASTLYVGQAGPLIRGAFHGAFQELKLYGSPSQAE
VQCVNTFEDMGKGSGSDEIDIDNDNFLVDQEEGDAEGGSGRYGTMPPFPPPPPGLDGYPL
RLRGEKGERGPRGPPGESIRGPPGPPGPPGPAGLPGVSAITEISGSGDDQIFGENYASLG
QCGCNSSTILSLLQTAPELQGPPGPPGLMGADGRTGPPGIAGQPGMPGERGPGGPRGEKG
ERGDSGPRGPEGLLGPKGEAGVDGRPGNPGPPGPPGPPGSSEYSNFDESIMGSYGGAIGR
PGAPGPKGDAGQPGPMGPTGERGFPGQKGDRGPAGLHGPKGDRGHPGPQGDRGLKGDQGS
PGLDGRPGIPGANGRPAEKGEKGEQGMPGPPGPPALPSGAYSSDNPEFLSTGHMTVSGSK
GDKGEKGEKGSRGNDGPQGFPGKDGKPGDRGDIGPSGMPGIEGPAGAPGLKGERGERGPP
GPISITSPGSDIITIKGDKGDAGVRGRRGRPGPPGSRGLQGLQGLPGPPGRPGEKGDIGI
PGWMGRPGTLGPPGNPGPAGPKGEKGDPGVNILDVSMFKGEKGDRGFDGLPGVPGSQGPP
GPPGPTSSLSDPVRYIPGPPGPPGPPGPPGPAGAPGATVVGPKGEPGSNYHEEYPVHGNT
KLYGRPGSYAHTSYNPNTHSDDSNTGRNQNNIPGAAVFQTTEEMLKLASSSPVGSLAYVV
EEQALLVKVNSGWQYVSLGSLVTHQAPAVPTPPQPTPPMPAASLVHVPPISNLVDNSPGA
NGPSLRLAALNEPLSGNMHGVRRANYACYRQAKRAGLRGTFTAFLTSRIQNLDTIVRYAD
RHLPIVNTQGDMLFKSYSDIFDGNGGIMAASPRIYSFNGKNIMTDSHWPQKIIWHGSHAS
GERALDTFCDEWQSDDPNRRGMAASLYSHKLLSQERYTCNNEFAVLCIEATSTLNFRKKR
DISSVNATGTLDDEDYLYNAEEYQQLLNEIFAQPFREN
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacgcccgcaattttcgcaaaccatgaagtgtttacggtaccactggctgctg
ctgccgctcttaacgaccctgtgctcggctaacgacggattgtttggctccaaattccaa
agcgatgttcccgaatacgacctgctgcacgccatcggcgttcctttcagcaacccaaag
acccaatacttcgacgaaggccttgacggcttccctgcctatggtctacgaccaggctca
gacatcaagtctccataccgcctcttcatgcctgagaagctttaccccgaattctctatc
actgctactgtcagaccagcgaacaaagatggcggatttttattctctgttgtcaaccca
ttagaaacggtagtccaattgggggttcaactgatcccttcgggtcctggtctcaccaac
atatccttactgtacactgacgcgaatatttacgctctttcccaaaccatcgcgtcgttt
gtagtgccatcttttgccaagaagtggagtcgcttcgcgatgagggtcacaactgacaat
gtgacgttgttcctgaactgtcacgagttcgacacggttgctgtaaagaggaatcctatg
gagctggtcttcgattcggcttctacgctgtatgttggacaagctggaccactcatcagg
ggagcttttcatggcgccttccaagagctgaaactgtacggatcgccatcgcaagctgaa
gtgcagtgcgtcaacacttttgaggatatgggtaaaggcagcggcagcgacgagattgac
attgacaatgacaatttcttggtggatcaagaagaaggtgatgctgaaggaggatcaggt
cgctatggaaccatgccgccattccctccgccaccaccaggcctcgatggatatcctctt
cggttgagaggagaaaaaggagaacgaggaccaagaggaccaccgggagagtcaatcaga
ggaccaccaggcccaccggggcctccgggacccgctggcctaccaggcgtgtctgctatt
actgaaatatccggctctggagacgatcaaatattcggagagaactacgcatcgttgggc
cagtgtggctgcaactccagcaccattctgtccctgctgcagacggctccggagctccag
gggcccccgggtccacctggcttgatgggggctgatgggaggaccggacctccggggata
gcgggtcagcctggaatgcctggtgaaagggggcctggtggcccaaggggagagaaggga
gaacgaggtgattcgggcccacgcgggcctgaaggcctactggggcctaaaggggaagca
ggggtagacggtaggcctggcaaccccgggcctcccggacctccagggccaccaggctct
tcagagtatagtaactttgatgaatcaatcatgggttcctatggaggagccatcggcagg
cccggtgctccgggtcctaaaggagacgcaggccaaccaggacctatgggtccaactgga
gaaagaggctttccaggtcaaaagggagacagggggccggcaggtctacatggacctaaa
ggagatcgtggtcatcctggtccgcaaggtgatcgaggattgaaaggtgatcaaggaagt
ccaggcttagatggtcgacctggcatacctggagctaatggaagacctgctgagaaagga
gagaaaggtgaacagggaatgccgggacctccaggcccaccggccttgccctcaggggct
tacagttcagataacccagagttcttatcaacgggacacatgactgtatctgggtctaaa
ggtgacaaaggagaaaagggtgaaaagggcagtcgaggtaacgacgggcctcagggtttc
ccaggcaaggatgggaagcctggtgatcgaggagatataggcccgtcaggcatgcctggt
atagaaggacctgcaggtgcaccaggtctaaagggagagaggggagaaagaggaccccct
gggcccataagtattacatcacctggatctgacattataactattaagggtgataaagga
gacgcgggcgttagaggacgccgtggtcgtccagggcctccaggatctcgtggcttacaa
ggccttcaaggattaccaggtcctcctggtaggcctggtgagaaaggtgacatcggcatt
cctggttggatgggaaggcctggcactctaggacccccaggtaacccgggaccagcaggt
cctaaaggggagaagggggatccaggcgttaacattttggatgtttctatgttcaaaggt
gaaaaaggagaccgaggatttgacggactccccggtgtaccagggtctcaaggtccccct
ggtcctcccggtcctacaagctctctgtcagacccagtccgatacatacctggccctcca
ggaccaccaggcccgccaggtccaccaggccctgctggagcaccaggcgcaacagtagta
ggacctaagggagaacccggatcgaactaccatgaggaatacccggtgcatggaaacacc
aaactttatgggcggccaggatcgtacgcgcatacaagctataaccccaatacacattcc
gatgactccaacacgggcaggaatcaaaataatataccaggagctgctgtgttccaaact
acagaagaaatgctaaagttggcatcatctagcccagtgggatctttggcgtacgtggtg
gaagaacaagcgttgctcgtgaaagtcaactctggctggcaatacgtatcgctggggtct
ctagtgacccaccaagcaccagccgtgccgacgcctccgcagcccactccacccatgcct
gcagcaagcctggtccatgtaccaccaatttctaacttggtggacaactctccgggggct
aatggacctagtcttcgattagcagcactcaacgagcccctctcaggcaacatgcacggg
gtacgaagagcaaactacgcatgctacagacaagcgaaacgtgccggcttgagaggcacc
ttcaccgctttcctgactagcaggatccaaaacctagacacaatagtgcggtacgcagac
agacatctgccgattgtgaacacccaaggcgatatgctgttcaagtcttactccgacatc
ttcgatggcaatggaggcatcatggcggcttctccaagaatatacagcttcaatggcaaa
aatattatgacggactcgcattggccccaaaaaataatatggcacgggtcccatgcgagt
ggcgagcgggcattggacacgttctgtgatgagtggcaatcggatgacccgaaccgaaga
ggcatggccgcctcgttgtactctcacaaactgctttcacaagaaagatacacgtgtaac
aacgagttcgcagttttgtgtatagaagctacatcaacgcttaatttccgcaaaaaacgt
gatatatctagcgtgaacgcgacgggaacattggacgacgaagactacctttacaacgca
gaagagtatcaacagctactcaatgagatatttgctcaaccgttcagagagaactaa
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