Ostrinia nubilalis (European corn borer): 135077460
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Entry
135077460 CDS
T10851
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135077460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onu03021
]
135077460
03041 Spliceosome [BR:
onu03041
]
135077460
03036 Chromosome and associated proteins [BR:
onu03036
]
135077460
Transcription machinery [BR:
onu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
135077460
Spliceosome [BR:
onu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
135077460
Complex B
135077460
Complex C
U2 SnRNP specific factors
135077460
Chromosome and associated proteins [BR:
onu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
135077460
TFTC complex
135077460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Fungal_virus_P2_N
Motif
Other DBs
NCBI-GeneID:
135077460
NCBI-ProteinID:
XP_063828077
LinkDB
All DBs
Position
13:6238007..6246245
Genome browser
AA seq
1216 aa
AA seq
DB search
MYLYNLTLQGSTAITHAVHGNFSGTKQQEIIISRGKTLELLRPDPNTGKVHTLMKVEIFG
IIRSMMSFRLTGGTKDYIVIGSDSGRIVILEYIPAKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADADPTGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATSMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILGCHVADLAGEDT
PQVYLACGRGPRSSIRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGNDALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLNDNTVRIISLDPSDCLSPRSMQALPAGAESLCIVEQPFESGAKSALHLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGYHYQNR
FHLTPLSYECLEYAAGFSSEQCAEGIVAISSNTLRILALEKLGAVFNQTYLPLEYTPRKF
VINSDNNHIIILETDHNSYTEDMKKQRRVQMAQEMREAAAGGGTEEQQLANEMADAFLSD
VLPENIFSSPKAGAGMWASQIRVADMGIGGGQPTTLFKLPLEQNEAAVSACVVRWAAQGH
SAPHLVVGVAKDALLSPRSCTDGSLHVYKIYNTGKLELVHKTPIDEYPGALASFNGKLLA
GVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFAADVQESVFCIKYKKRENQL
IIFADDTNPRWITNECILDYDTVAISDKFGNIAVMRLPQSVSDDVDEDPTGNKALWDRGL
LNGASQKGEITVNFHVGETVTSLQRATLIPGGSEALLYATVSGSLGVLLPFTSREDHDFF
QHLEMHMRSENSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIASDLERTP
AEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacaatttaacgctacaaggctctacagccattacacatgcggtgcatggt
aatttctctggcacgaaacagcaggagatcatcatatcacgtggaaagacattggaatta
cttcgaccagaccctaacactggaaaagtgcatactttgatgaaagtcgagatattcggc
attatccggtcaatgatgtcatttcggcttaccggtggcacaaaagattacattgtcatt
ggatcagattccggccgtattgtaattttggaatacatccctgccaaaaatattttggaa
aaggtccaccaggagacatttggcaagtctggatgccggaggattgtgcccggccaatat
ttggccatagaccccaaggggcgagctgttatgattggtgccattgaaaagcaaaagcta
gtatacattttgaacagagatgcagaagcaaggttaactatctcatccccactggaggcc
cacaaatctaacaccttggtgtaccacatggtcggcgtagatgttggctttgaaaaccct
atgttcgcatgcttggaaattgattatgaggaagcagatgctgaccctactggtgaagct
gcacagaaaacacaacaaaccctaacattttatgaactggatttgggtttaaatcatgtt
gtcagaaaatattcagagcctcttgaagagcatgccaattttctcataactgtacctggt
gggaatgatggaccctccggagtacttatttgttctgaaaattacctcacatataaaaat
cttggtgaccaacatgacatcagatgtcccatacctcgacgacggaatgatttggatgac
ccagagagaggaatgatctttgtatgctcagccactcataaaactaaatctatgttcttc
tttttggcacaaactgagcaaggggacattttcaaaatcaccattgaaactgatgaggac
atggtcactgaaattaagttgaaatattttgacacagtcccagttgcaacttcaatgtgt
gtgctgaaaactggatttttgtttgtggcctgtgaatttggaaaccactacttgtaccaa
attgctcatttgggtgatgaggacgatgagccagaattcagttctgctatgccattagaa
gaaggcgacacatttttctttgctccaaggccccttagaaatttggtactggttgatgaa
ctggattcactttcgcccatcttaggctgccatgtggctgacctagctggggaagacacc
ccacaggtctatttggcctgtgggcgtggcccacggtcttcaataagagcacttagacac
ggtttagaagttgctgaaatggctgtgtctgagctcccagggtctcccaatgctgtatgg
actgtcagacggcacaaggatgaggagtatgattcttacatcatagtgtcattcgtaaat
gctacgcttgtactctctatcggtgaaacggtggaggaagtgacggactctgggttcttg
gggaccacgccgacgctcagctgccacgcgctgggaaacgacgcgctggtccaagtgtac
cccgacggcattcgccatattcgagctgacaaaagagttaacgaatggaaggcgccaggc
aaaaagtctatcgtcaaatgcgcggtcaaccaacgtcaagttgtgatcgcgctcactggc
ggtgaattagtttatttcgaaatggaccctactggtcaactaaatgaatatacagagcgg
aaaaagttatcctctgatgtatcatgcatggccttgggatccgtggctactggagagcag
agggcctggtttttagctgtaggcctgaatgacaacacagttcggattatttcattagac
ccatcggattgcctctcgcccagatctatgcaagccttgccagctggtgcagaatcattg
tgtattgtggagcaaccatttgaatcgggagccaaatctgcattgcatctcaatattgga
ctaagcaatggtgtactcctaagaacaactttggattccgttagcggcgatttagcagac
acaagaacaaggtatcttggatcaagaccagtaaaactcttcaaagtgcgagtgcaagca
gcagaggcagtattggcggtgtcatcgagaacttggctgggatatcactaccagaacaga
ttccacctcacgccgctttcgtacgagtgcttggagtatgctgcagggttcagttcagaa
cagtgcgccgagggtatcgtagcaatctcttcaaacaccttgaggatcttggcactagaa
aaattaggcgctgtgtttaaccagacatatctgccactggagtacacgccaagaaaattt
gtgataaacagtgacaacaaccacatcattattcttgagactgaccacaactcgtacact
gaagacatgaagaaacaaagaagggttcaaatggcgcaagaaatgcgtgaagcggcagcc
ggcggtggcacagaagaacagcaactcgctaacgaaatggcggacgctttcctctcggat
gtattgccagaaaatatcttttcctcgcctaaagctggtgcaggtatgtgggcgtcacaa
atacgcgtagccgacatgggcatcggcggcgggcagcccaccacactattcaagctgcca
ctagagcagaacgaggcagcagtgtcggcatgcgtggtgcgctgggctgcgcaggggcac
tcggcgccgcacctcgtagtgggcgtggctaaagatgctctgctgtcgccgcggtcgtgt
actgacggcagcctgcacgtttacaagatatacaacactggaaaattggaattggtgcac
aagactcccatagatgagtatcctggagccctagcctcgttcaacgggaaactcctcgcg
ggcgtgggccgcatgctgcgactgtacgacatcggcagaagaaagttgctgcggaaatgc
gaaaacagacacattcccaatctgatagcagatatcaaaaccattggacagagaattttc
gctgccgacgtacaggaatctgtattctgcatcaaatacaagaagagggaaaatcaactg
attattttcgctgacgacacaaacccgagatggatcaccaatgaatgcattttagattac
gatacagttgcgatatcggataagtttggaaacatcgccgttatgaggttaccacagtct
gtttcggatgatgttgatgaagacccaacaggaaacaaagcattatgggacagaggtctt
ctcaacggtgcgtcacaaaagggcgaaataactgtcaacttccacgtcggagagacagtg
acgtcactccagcgagccacgctgatccccggtgggtcagaggcgctgctatacgcaaca
gtcagcggttcgctgggcgtcctgctgccgttcacgtcccgggaagaccacgacttcttc
caacatctggagatgcacatgagaagcgagaactcgccgctatgcgggcgcgatcacctc
tcgttcagaagttactactaccctgtgaagaatgtcatcgacggcgacctgtgcgaacag
ttcaactcgttggagcccgcgaaacagaaagcaatagcaagtgatctggagagaacgccc
gccgaagtctcaaagaagctggaggatatcagaacaagatatgcattttag
DBGET
integrated database retrieval system
