| Entry |
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| Name |
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
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| KO |
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| Organism |
onu Ostrinia nubilalis (European corn borer)
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| Pathway |
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| Brite |
Enzymes [BR:onu01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135077592
Transcription machinery [BR:onu03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135077592
DNA repair and recombination proteins [BR:onu03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135077592
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
13:9059204..9069023
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| AA seq |
782 aa
MGPPKKFKKYDSKPGSDRSGKKKKVEEDMTIDLVDDENTENVGVPGAAMQDAEKNDQVPD
DEFGAKDYRNQMELKPDNASRPLWVAPNGHIFLEAFSPVYKHAHDFLIAIAEPVCRPQHI
HEYKLTAYSLYAAVSVGLQTGDIVEYLQRLSKCTVPAGIIEFIQLCTLSYGKVKLVLKHN
RYLVESKHVEVLQKLLKDPVIQQCRLRRDGDEDFLASALPNKTATAAVPGGAKPADDKPA
ANGTVPDDISQFYQQLDKDDDDDETTDIVANTAVAFEVDPDKIEVIQKRCIELEHPLLAE
YDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAV
CTVRKRALVLCNSGVSVEQWKQQFKCWSTADDSMICRFTSEAKDKPMGAGILITTYSMIT
HGQRRSWEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLRED
DKIADLNFLIGPKLYEANWLELQANGYIARVQCAEVWCPMTPEFYREYLIQKINKKMLLY
VMNPSKFRACQFLVRYHERRGDKTIVFSDNVFALRHYAVKMNKPYIYGPTSQSERIQILQ
NFKFNPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGALAEE
YNAFFYTLVSQDTLEMAYSRKRQRFLVNQGYSYKVITELKGMEQEPDMFYGSREEQGMLL
QQVLAASETDCEDEREGGPGGVGGTARRGGALSSLAGADDALYLEHRRGPANKHPLFKKF
RC |
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| NT seq |
2349 nt +upstreamnt +downstreamnt
atgggacctcctaagaaattcaaaaagtatgactctaaacctggaagtgacagatcaggt
aagaaaaagaaagtggaagaagatatgactatagacctggtggatgatgaaaatactgag
aatgttggagtgcccggagctgctatgcaggatgctgaaaagaatgaccaagttcctgat
gatgaatttggagcaaaagattacaggaaccaaatggaactgaagccagataatgcaagt
cgtcccttatgggtggcaccaaacggtcacatatttcttgaagcattttctccagtttac
aaacatgcacatgactttctgattgcaatagcagaaccagtttgcaggcctcaacacatt
catgaatacaaattgacagcttacagtctgtatgcagctgtgtctgtagggttacagacc
ggtgacatcgtagagtacctgcaaaggctcagcaagtgcacggtgcctgctggaatcata
gaatttatccaactttgtacattatcttatgggaaagtgaagcttgttcttaaacacaac
aggtatctagttgagagcaaacatgttgaagtgttacagaagttactcaaagaccctgta
atacaacagtgtaggttacgtagggatggtgatgaggattttctagcgtctgcactaccc
aacaaaacagcaacggccgctgtacccggtggtgccaagccagctgatgacaaaccagct
gcaaatggcacagtaccagatgacatcagtcaattttatcaacagcttgacaaagacgat
gatgatgatgaaaccactgacattgtagcaaacacagcagtcgcttttgaagtagatcct
gacaaaattgaggtaatacaaaaaagatgtattgaactggaacatccgttactagcagaa
tacgattttcgtaatgattctgtaaatccggatatcaatattgatctgaaaccgacagct
gtgcttcgtccctaccaagagaagagtttgaggaaaatgttcggcaatggtagagcaagg
tcgggcgtgatcgtgctgccgtgcggcgcgggcaagtcgctggtgggcgtgacggcggtg
tgcacggtgcgcaagcgcgcgctcgtgctgtgcaactccggcgtgtcggtggagcagtgg
aagcagcagttcaagtgctggtccacggccgacgacagcatgatctgcaggttcacatca
gaagcgaaagacaagccaatgggggcgggcattctaatcaccacgtattccatgatcacg
cacggccagcggcgttcttgggaagcggaacagaccatgaagtggctgcaggcgcaggag
tggggactggtggtgctggacgaggtgcacaccatccccgccaagatgttccgccgcgtg
ctcactatcgtgcactcgcacgccaaactcggtcttactgcaacgctccttcgtgaggac
gacaaaatcgctgatctgaacttcttgatcggaccgaagttgtacgaagctaactggttg
gagctgcaggctaatggatatatcgcgcgtgtgcagtgcgctgaagtgtggtgccctatg
actccagagttctaccgcgagtacctaatacaaaagatcaacaagaaaatgctgctatac
gtgatgaacccatcaaaattccgcgcctgccaatttctggtccgctaccacgagaggcgc
ggcgacaaaaccatcgtattttccgacaacgtattcgcacttcggcactacgccgtcaaa
atgaacaagccctatatctacgggcctacgtcacagagtgagcggatacagatccttcaa
aacttcaagttcaacccgaaagtgaacacgatattcgtcagtaaagtggcggacacgagt
ttcgatctgcccgaggcaaacgtgttgattcagatctcttcgcacggcgggtccaggcga
caggaggcacagagattgggtcgaatcttgagagcgaaaaaaggcgccttagcagaggaa
tataatgccttcttctatactttggtatcccaggacacattagaaatggcgtacagtcgt
aagcgacagcggttcttggtcaaccaagggtacagttacaaggtaataacagaattgaaa
ggaatggagcaagagccagatatgttttatggatcacgcgaagagcaagggatgctgttg
caacaagtgctagcagcgtccgagaccgactgcgaggacgagcgcgagggtggcccaggt
ggcgtgggagggacggcgagacgtggcggcgccctgtcatcgctggccggcgccgacgac
gcgctgtacttagagcaccggcgcgggcccgccaacaagcacccgcttttcaaaaagttc
cgctgctag |
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