Ostrinia nubilalis (European corn borer): 135078247
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Entry
135078247 CDS
T10851
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9-like
KO
K18735
protein SMG9
Organism
onu Ostrinia nubilalis (European corn borer)
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onu03019
]
135078247
Messenger RNA biogenesis [BR:
onu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
135078247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
ABC_tran
nSTAND3
DUF6079_1st
FlaG
KAP_NTPase
MMR_HSR1
NB-ARC
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
135078247
NCBI-ProteinID:
XP_063828918
LinkDB
All DBs
Position
14:14037294..14051032
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AA seq
472 aa
AA seq
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MSDKKKKVFTPKEYTTTRRPVILKSDRDPPKEQPKEKPEREKQPTIILKTREQSTSKEER
PLSPKSVKSPTSENDGIQPSKIAHNENKEKRESKPSPPLKFMTEPVKLLDENLEFNNAAL
EFLHDSSTNYLVVGIIGNQGVGKSMIMNLIALNTHTEELCNHILHSHELADSTFVLNDVS
AVSNQLEALDFSGMHEKKTSAVDFKFKMQDIEQIERGTHCTKGIDMYITNDRVILLDCQA
LWSPSLIEESNTNPITARSTNVMTVDCLQIASYLMAICHVLIGVQDWFTDYNFIRYIQAA
EMLKPSLSGSSGSQEPNEPAHGADSQPHLLLLHNRCQLEDFTPEAVTAMQDVYRKAFQKS
NLQLQSGMYLYNDCNRNGPGSSLGALSERCGAPLNLILLPEIQPCGNQETYRGHPPFEQL
AKRLRWMVMGVHRHQITNVPNLSEKGWFHFCTKAWETIRKCTFFMEYERFLP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaaagaaaaaagtgttcacgccgaaggaatacactacaacaaggcgtccg
gtcattttaaaatcagacagagatcctccaaaggagcaacctaaagaaaaaccagagagg
gaaaagcagcccacaataatacttaagacacgtgagcaaagcacctccaaggaagaacgc
ccgctaagccccaaaagtgtaaagtctccaacatcagaaaacgatggaatccagccgtca
aaaattgctcataatgaaaataaggaaaaaagagagtcaaagccaagtccgccattaaaa
ttcatgactgagcctgtgaagttgttggatgagaacttggagtttaacaatgctgccctg
gaattcctacatgattctagcaccaactatttagttgtaggcattattggtaatcaagga
gttgggaaatcaatgattatgaatctaatagccctgaacacacacacagaagaactgtgt
aaccatatattacactcacacgaactggccgacagcacatttgtgttgaatgatgtgtct
gcagtttctaatcagttggaagccttagacttctctgggatgcacgaaaagaaaacttct
gctgttgactttaagttcaaaatgcaggacattgagcagattgaaaggggcacccattgt
accaaaggcatagacatgtacataaccaacgacagggtcatcctgctagactgccaagcg
ctgtggtctccgtcgctgatcgaagagtcaaacaccaaccctataacagccaggagcact
aacgtaatgaccgtggactgcttgcagatagcctcgtacttgatggcgatatgccatgtt
ctaattggagtgcaggactggtttacggattataattttatcaggtacatccaagctgcg
gaaatgttgaagccatctttgtcaggttcaagtggcagccaggagcccaacgagccggca
cacggcgcggactcgcaaccgcatctactgctgttacacaacagatgccagcttgaagat
ttcactccagaagctgttacagctatgcaagatgtctacaggaaagccttccagaagtcg
aacctgcaactgcagtcgggaatgtacctgtacaacgactgcaaccgcaacgggccgggc
tcgagtttgggcgcgctgagcgaacgctgcggagcgccgctcaacctcatcctgctgccc
gagatacagccctgcggtaaccaagaaacctaccgcggccacccgccattcgaacagctg
gccaagcgtctccgctggatggtgatgggagtacaccgccaccagataaccaacgtgccc
aatctctccgaaaaaggctggttccacttctgcaccaaggcctgggagaccatccgaaaa
tgcaccttcttcatggagtacgaaaggttccttccctga
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