KEGG   Ostrinia nubilalis (European corn borer): 135078326
Entry
135078326         CDS       T10851                                 
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
onu  Ostrinia nubilalis (European corn borer)
Pathway
onu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:onu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    135078326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:onu03021]
    135078326
   03019 Messenger RNA biogenesis [BR:onu03019]
    135078326
Transcription machinery [BR:onu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     135078326
Messenger RNA biogenesis [BR:onu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     135078326
    U7-dependent histone pre-mRNA processing factors
     135078326
SSDB
Motif
Pfam: SYMPK_PTA1_N Symplekin_C AAA_lid_10
Other DBs
NCBI-GeneID: 135078326
NCBI-ProteinID: XP_063828995
LinkDB
Position
14:complement(10482338..10496832)
AA seq 1352 aa
MSSKFHQAANVTAQNQLVQWINEAGMSEGGKKTALLRKIIELLLHSASQMIPVYMENILS
YVNDKSTDVKKQVITFIEEMSKLHPEYLPKVIGQLRLLVADTVIAVQKRAIQAASIVYRN
TLLWICKTDAEMSEMQYVWDNLTQLKLMVLNMIDSDNEGIRTHSIKFLEEVVLLQSPGEG
TEDDFSLESFPATLPFINRKAIEEESEHIFDLLVKFHNSQHISSVNLMACMTTLCLLAKF
RPKYMPRVIQALGDLHTTLPPTLSQSQVNSVRKHLKMLLINIIKHPSSNEMMPQLTQLLV
DIGMTTQEINKVIPKERRNKRVGELKSGEIPSKRFRVDSPQSVSQGSDSNSNSRSDFNMF
EEDSSQGAQKPAVTEDTIYEGLNNVENVVNLVTTTLVNQLPVDMPSNFVTAYKPIPNSGS
KVQKKHLAKMMLALIKDEAVIPVPPPSQPTLSDLAAKIPLLRDDDEKTTLKNAVAKLQES
TKADRQMESAVSKLMEETRQEHLKEEERKAKEKEKPVPPPTPSVPKLKQKVKLLKLQEIT
RPIPKEIKERLMIQAVNRILHAEKESAIGGAAQIRAKFITIFASSYTPEIRELVLNYILE
DPANRIELALSWLYEEYAFMQGFNRHPVTLQPKLHEKHDQNYNQLLCALITQISERGDPT
MENSKDVLLRKIYAEAPVITSEAVDYLKHLVSEDKVAFLALEILEELCIMRPPRSHKFMN
SLVCHVLNENIEIRDATLKSVVKIYQCGTEAAKKVIEKHALLYLGFISLSSPPPELVSAR
HHGLRVPWNDEMVKVCLSLVMALFPYNEELIIEVARVYGCAGSEAKRVVLRVVEGPVRAA
LATPNPDGGDSALRPAFRDLLDECPRGAETLLTRLVHIFTEKSAPSAELVSRVRELYATR
VSDVRFLIPVLTGLSKKEILAALPKLIKLNPVVVKEVFNKLLGLQNPNEESPVDPVELMI
ALHLIDPSKADLKYIIKATALCFGEKQTYTQDVLSAVLQRLAEENEIPVLMMRSVLQALT
LYPALAPLVLNILQLLVEKEVWLNKVAWEGWVKCCERLLPQACFLLVSLPARALQAASPA
LLAALRAHAAGLSPAERALLPPHVARLERASSSMLRQACFLLVSLPARALQAASPALLAA
LRAHAAGLSPAERALLPPHVARLEVNTIMCCERLLPQACFHKRASSSMLPQACFLLVSLP
ARALQTASPALLAALRAHAAGLSPAERALLPPHVARLERASSSMLPQACFLLVSLPARAL
QAASPALLTALRAHAAGLSPAERALLPPHVARLERASSSMLPQACFLLVSLPARALQAAS
PALLAALRAHAAGLSPAERALLPPHVARLECL
NT seq 4059 nt   +upstreamnt  +downstreamnt
atgtcgtctaaatttcatcaggccgctaatgttacggctcaaaaccagcttgtacaatgg
atcaacgaagctggtatgagcgaaggtggcaaaaaaactgccctgttgaggaagattata
gagctactgctccattctgcctcacaaatgataccggtctacatggagaatatcttgagt
tacgttaacgataagtctactgacgtgaagaaacaagttatcacatttattgaagaaatg
agcaaactacatcccgagtatctaccaaaagttattggacagcttcggctacttgtagcg
gacaccgtaatcgcagtgcagaagcgagccatccaggccgctagtatagtctacagaaac
acgctgctgtggatatgcaagaccgatgcggagatgtccgaaatgcagtacgtctgggat
aaccttactcaactaaagctcatggttctaaatatgatagacagcgataacgaaggtatc
aggactcactccatcaagttcctggaggaggtggtcttgctgcagagccctggtgagggc
acggaggatgacttcagcctcgagagcttcccggccactctgccttttataaatagaaaa
gctattgaagaagaatcagaacatatttttgacttgctagtcaagttccacaattctcaa
cacatttctagcgtgaatttgatggcttgtatgacaacactatgtctactggccaaattc
aggcccaaatacatgccacgagtcatacaagctctaggcgatctgcacacgaccctgccg
cctacgctatcacagtcacaagttaactcagtcagaaaacacctgaagatgttactcatt
aacattataaagcatccctcttcaaacgagatgatgccccaactcactcaactgttggtt
gatataggcatgaccactcaggaaataaacaaggttatacctaaagaacgaagaaacaaa
cgcgtaggtgaattgaaatctggagaaattccatctaaaagattcagggtagattcccca
caaagtgtcagtcagggaagcgacagcaatagcaatagtcgcagcgactttaacatgttc
gaagaggacagcagtcaaggtgcacaaaaaccagcagtcactgaagacactatctacgag
ggactgaacaacgttgagaatgtcgtcaatctcgttacgactacattagtcaatcaacta
ccggtcgacatgccttctaatttcgttactgcttataagcctataccgaattcgggtagc
aaagttcaaaagaagcatttggctaaaatgatgctggcgcttataaaagacgaggcggtc
attccagtgcccccgccctcacaacccacgctgtctgacttggctgcgaaaattccgctg
ctcagagatgacgacgaaaagaccaccctcaaaaacgcagtggcaaagttacaagaatcc
acgaaagcagacagacaaatggagagtgctgtttctaaactcatggaggaaacacgacaa
gagcatctgaaggaggaagagagaaaagccaaagagaaggaaaaacctgttcctccaccc
acaccgtcagtcccgaagctcaagcaaaaggtcaaattgttgaaactgcaggaaataacc
cgtcctatccccaaagaaataaaggagagattaatgatacaggctgtgaacagaattttg
cacgcagaaaaggagagcgcgataggcggcgcggcgcaaataagggcgaaattcataacg
atttttgcatcaagttacacgccagagataagggaattggttctgaattacattttggaa
gatcctgcaaacagaatagagttagcattatcttggttgtacgaggagtatgctttcatg
cagggcttcaatcgtcatccagtgacattgcagccgaaattacacgagaagcacgatcag
aattacaatcagttgctgtgcgctttgatcactcaaatatcagagagaggggatcctact
atggagaatagcaaggatgtactgctcagaaaaatatacgcggaagcacctgtgataacg
agtgaagctgtggactacctcaaacatttggttagcgaggacaaagtggcgttcctagcg
cttgaaatattggaggagttgtgcataatgaggccgccgcgctcgcataaattcatgaat
tctttggtttgccatgttttgaacgaaaacatcgagatccgagacgcaactctaaaatcg
gtcgtgaagatttaccaatgcggtacagaggcagccaagaaagtcattgagaagcatgct
ctcctatacctcgggtttatttcgctgtccagtccgccgcccgagctggtgtctgcaagg
caccatgggctgagggtgccgtggaacgatgagatggtgaaggtctgcctgagtttggtt
atggctctgttcccgtataatgaggaactaataatagaagtggctcgcgtatacggttgc
gcgggctctgaagccaaacgcgtggtcctacgagtggtggagggtccggtacgggcggct
ctcgcgacgccgaatcctgatggcggggactccgccctacgtcccgccttcagagaccta
ctggatgaatgcccgagaggagctgagacgctgttgaccaggctggtgcatatattcacg
gagaaatcggcgccgagcgcggagctagtgtcgcgtgtacgggaactgtacgcgacgcga
gtgtcggacgtgcgcttcctcatccccgtgctcaccggactctccaagaaggagatatta
gcagctttaccaaaactaataaaattaaacccggtggtcgtgaaagaagtcttcaacaag
ttgcttggcttgcagaatcctaacgaagagtcaccagtcgacccagtggaactgatgatc
gctctccacctgattgatccgagcaaagccgacttgaagtacataattaaggccactgcc
ttatgtttcggcgaaaaacagacttatacacaagatgtgctgtcagcggtcctgcagcgg
ctggccgaagagaatgagatcccggtgctgatgatgcgttctgtcctgcaagcgctcaca
ctttaccccgcgctggcgcccctcgtgctgaacatcctgcagctgctggtggagaaggag
gtgtggctgaacaaagtggcgtgggagggctgggtgaagtgctgcgagcgtctactcccg
caagcctgcttcttactagtgtcgctgccggcgcgcgcgctgcaggccgcgtcgcccgcg
ctattagcagcgttgcgcgcgcacgcagcgggcctgtcgccggccgagcgggcgttgttg
ccgcctcatgttgctaggttggagcgtgcttcctcaagcatgctgcggcaagcgtgcttc
ttactagtgtcgctgccggcgcgcgcgctgcaggccgcgtcgcccgcgctactggccgcg
ttacgcgcgcacgcggcgggcctgtcgccggccgagcgggcgttattgccgccgcacgtg
gcacgattagaggtaaacacaatcatgtgttgcgagcgtctgcttcctcaagcatgcttt
cacaagcgtgcttcctcaagcatgctgccgcaagcctgcttcttgttagtgtcgctgccg
gcgcgcgcgctgcagaccgcgtcgcccgcgctattggccgcgttacgcgctcacgctgct
ggcctgtcgccggccgagcgcgcgttattgccgcctcacgtggcacgattagagcgtgct
tcctcaagcatgctgccgcaagcgtgcttcttacttgtgtcgctgccggcgcgcgcgctg
caggccgcgtcgcccgcgctattaacagcgttgcgcgcgcacgctgctggcctgtcgccg
gccgagcgggcgttattgccgccccacgtggcacgattagagcgtgcttcctcaagcatg
ctgccgcaagcgtgcttcttacttgtgtcgctgccggcgcgcgcgctgcaggccgcgtcg
cccgcgctattagcagcgttgcgcgcgcacgctgcgggcctgtcgccggccgagcgggcg
ttattgccgccccacgtggcacgattagagtgtctctga

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