KEGG   Ostrinia nubilalis (European corn borer): 135078637
Entry
135078637         CDS       T10851                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
onu  Ostrinia nubilalis (European corn borer)
Pathway
onu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135078637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:onu03041]
    135078637
Spliceosome [BR:onu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    135078637
 Complex C
   U5 SnRNP specific factors
    135078637
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR19_1st eIF2A Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR75_2nd Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_HPS5 KNTC1_N Cytochrom_D1 Beta-prop_Nup120_160 WDR54
Other DBs
NCBI-GeneID: 135078637
NCBI-ProteinID: XP_063829235
LinkDB
Position
15:714973..717141
AA seq 348 aa
MPEIEKRKAEDFSLVPSKRTRHEISVVGTREKAVVTSAVPRTSSLYAPIMLLEGHQGEIF
TAKFHPEGKHLASAGFDRQIFVWNVYGQCENVMVMKGHTGAVMELCFSPDGSHLYTCATD
NTVAVWDVPTGVRIKKLKGHANFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPIASF
DNGYPVTSVLFNDTAEKIISGGVDNIIKVWDIRTNQISYKIKGHTDTITGMALSYDGSYL
LSNSMDSTLRIWDVRPFAPSERCVKLMSGHQHNFEKNLLRCSWSHDGSKVAAGSSDRFLY
VWDTTSRRVLYKLPGHNGSVNDVDFHRTEPIVMSASSDKQIYLGEIDH
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgcctgaaattgaaaaaagaaaagctgaagatttttccttagtgccatcgaaaagaact
aggcatgagatttcagtggtcggcactagagaaaaagcagtagtgacttctgctgttcca
cgcacttcaagtttatatgcgcccattatgttactagaaggacatcaaggcgaaatcttc
actgctaagttccacccagaagggaagcatttagcttcagctggtttcgataggcaaatt
tttgtatggaatgtttatgggcaatgtgaaaatgtgatggtgatgaagggacacacgggt
gccgtcatggagctgtgcttctctccagacggctcccacttgtacacctgtgccacggac
aacacggtcgccgtgtgggacgtgcccaccggggtccgtatcaagaaactcaagggacat
gctaattttgtcaactctgtatcaggtgcaagaaggggcccagaactattagtatcggct
tctgatgataacaccataaagctgtgggatgcccggaagcggaaccctatagcctccttt
gacaatggctaccctgtcacatcagttttgttcaatgacacagcagaaaagatcatttct
ggtggagttgataacatcatcaaggtctgggatattagaacaaatcagatttcttacaaa
attaaaggacacacagatactatcacaggcatggctctgtcatatgacggatcctaccta
ctttccaactctatggatagcacactgagaatatgggatgtgaggccttttgcgccttca
gaacgctgcgtcaagctaatgtcgggacaccagcacaacttcgaaaagaatctactgcgg
tgttcctggtcacatgatggctctaaggtggcagcagggtcctctgatcgattcttatac
gtctgggacacaacatctcggcgagttttgtacaagctacctggccataatggatctgtc
aatgatgtggactttcaccgtacagagcccattgtgatgtctgcttccagtgacaagcag
atatatctgggagagatagaccattaa

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