Ostrinia nubilalis (European corn borer): 135078931
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Entry
135078931 CDS
T10851
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135078931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onu03019
]
135078931
03012 Translation factors [BR:
onu03012
]
135078931
Enzymes [BR:
onu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135078931
Messenger RNA biogenesis [BR:
onu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135078931
Translation factors [BR:
onu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135078931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_N
HA2_C
OB_NTP_bind
ResIII
AAA_19
nSTAND3
Cas3-like_C_2
AAA_22
AAA_11
SRP_TPR_like
ABC_tran
nSTAND1
Rad17
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
135078931
NCBI-ProteinID:
XP_063829601
LinkDB
All DBs
Position
15:complement(9033250..9045411)
Genome browser
AA seq
1075 aa
AA seq
DB search
MSDRGDRGKRYRKDKGWGSSKFIQPVARHPHRLKGKDIGLFYKRQQARRNKNTPLTINLS
IPSSVIAKLISNIQLITKLAAQQKIDIFPEKISHLFSQKASLSNISSDKKDSEVPKSSQA
IAAPEAHTSQRSDVDSKTSVKTKINTNYYFDSDSTPSTSVDDIPFALDEASDTDRKDFDE
RVLSLRAPADFKYGYKDIITGTFKEKLNECLARGINITRQDEDIATLNLVLYEEHLNALS
KSHYKKLLTFREKLPAYKKTQRVLEMVKNNQVIVISGETGCGKSTQVPQMILDDAIMKKR
GGNVKILVTQPRRIAASSLASRVAQERAEALGVSVGYAVRLEKVDCRPRGSIMFCTTGVL
LVDLEVNQALSDYSHIILDEVHERDTHVDFAMCMLKQVLQKRKDLKLILMSATLDAEKLC
NYFNFCPMLHIEGLAYPVKDVYMEEILHLTNYQLGEEVMPQRPKNYRGRKFDRSIHEQME
KSIQYKAEIAPWLESVKKFMDSKIYRTLQNPKIEELNYDLMLELIKYICRGPPGAILVFL
PGIGEITKLMSMLYDNERYLGSKCEIHPVHSKLPSLDQRRIFERPPHNVRKIVIATNIAE
TSITIDDIVYVIDCGKIKYSGLNVEHYFSTLKVEWASQANMRQRRGRAGRCQPGVCYHLV
TTFRAAKLPERLLPEMQRNNLLEPVLMIKQLRLGNAAEALKQFPDPPEEETVKRAVKHLQ
QCGALDDEEKLTPLGWHLARLPVHPAAGKLLVLGALFGCLDRAASVAAVWSFKDPFLLIL
DKDNEIKEVKRQLAMGEPSDHMALSEAIIQWEQCDPGERKAFAYANFLSNSTLELLSEMK
KQLGGNLQQMGFLNTGRVTSTFENRNYENLSLFKAIVAASLYPNITSVRWINLHARNPNK
QIRVCPKSPDGPMTIHPSSLMSPPKRLPHRPLPPRTPPCLNPGANWLVYWLKQKSSDMFL
IDVTLVYSLPLLFFGELNISETEQNEPNYCYVWITCYRVKMLKETAKLLFQLRSLLDQVL
ASKIMVRSKHSTTHNSDFEEKVLNAVIEVITAEDERAEYLDGGTESDTSESDSRY
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcgcggtgatcgtggtaaaaggtataggaaggataaaggttggggtagttca
aaattcatacaacccgtagccagacatccacatcgattgaaagggaaagatattggcctt
ttttacaagagacaacaagctaggcgaaataaaaatacacctctaacgataaatttatcc
atcccaagttctgtaattgctaagttaataagcaatatacaacttatcactaagttagca
gctcaacaaaaaattgatatattccctgaaaagatatctcatttgttcagtcaaaaagct
tctttatcaaacatttcgtcagataaaaaagactctgaagtgccaaaatctagtcaagca
atcgctgcacctgaagctcatacaagtcaaagaagcgatgttgattccaaaacgtcggta
aaaacaaaaattaacacaaattattattttgatagtgattctacaccaagtacttcagtt
gatgatataccatttgcacttgatgaagctagcgatacagacagaaaagattttgacgaa
agagtgttgagtctaagagcaccagcagattttaaatatggatacaaagacataattact
ggaacgtttaaggaaaaactcaatgaatgtctggccagaggcataaacatcactagacaa
gatgaagatattgcaactttaaatctcgttctgtatgaagaacatctaaacgctttatca
aaatcacactacaaaaaactgttgacgttccgtgaaaaattgccagcttataagaaaact
cagcgtgttttagaaatggttaaaaataaccaagtgattgtcataagtggagaaactgga
tgtgggaaatcaacacaggtaccacaaatgattttagatgatgctattatgaagaaaagg
ggcggcaatgtaaagattctagtcactcagccaagaaggattgctgcgtcgtcattagct
agtcgagtggcccaagaacgtgctgaagctcttggggtttccgtaggatatgctgtgcga
ttggaaaaggttgactgcagaccacgtgggagcataatgttttgcaccaccggtgttctt
ctggtggacttggaggtcaaccaagcgctgtcggactacagccacatcatactagacgaa
gtgcatgagagagacacccatgttgatttcgctatgtgtatgctaaaacaggtgttgcaa
aaacgtaaagatttgaagttgattctgatgagtgctacactagacgccgagaaattgtgc
aattactttaacttctgtccaatgctgcacatcgagggcttggcatatccagtcaaggat
gtttacatggaggagattctgcatctcacgaactatcagctgggggaagaagttatgccg
cagagacctaagaactaccgcggcagaaagtttgacagatctatacacgaacaaatggaa
aaatctatacagtacaaagctgaaattgcaccatggttggaatccgtaaagaaattcatg
gattccaaaatctaccgcactttacaaaatcctaaaatcgaagaactcaattatgatctg
atgcttgaactaataaaatacatttgtagagggcctccaggtgctatattggtgtttttg
cctggtattggggaaataacgaaacttatgtcaatgttatatgacaatgaaaggtatttg
ggatcaaaatgcgagatacaccctgttcactcaaaactgccatctcttgaccagcgcaga
atattcgaaagacctcctcacaatgtgaggaagattgtgattgcaacgaatatcgctgag
acttcaatcactatagatgacattgtgtacgtcattgactgcgggaaaattaaatacagc
ggtctaaacgtcgagcattacttctccactttgaaggttgaatgggcttctcaggcgaat
atgcgtcaaagacgcggtcgcgccggccgttgccaaccaggcgtctgctaccacctagtg
acaaccttccgtgctgcgaagcttcccgaacgcctcctgccagagatgcaaaggaacaac
ttgctagaaccggtgctgatgattaagcagcttcgacttgggaatgcagcagaagctttg
aagcaattccctgatccacctgaagaggagactgtgaagagagctgtgaagcatttgcag
caatgtggagcgctggacgacgaagagaagctgaccccactgggatggcacttggcgcgc
ttaccagtgcaccctgcagcaggcaagctactggtcctaggcgccctgtttggatgcctc
gaccgagcggcgagtgtggcagctgtgtggagcttcaaagacccgttcctgcttatactt
gacaaagataacgaaataaaagaagtaaagcgccagctagcaatgggcgagcctagcgat
catatggccctatccgaagccataatacaatgggagcaatgtgacccaggagagcgcaaa
gcattcgcttatgcaaacttcctatcaaacagtacgttagaactgctgtcagaaatgaag
aaacagctaggaggaaacttgcagcaaatgggattcttgaatacgggaagagtgacatcc
acatttgaaaacaggaactatgagaatttgagccttttcaaggctattgtcgcagcatcg
ctgtaccccaatattacctctgtcagatggataaatttacacgctcgtaatccaaacaag
caaatacgagtgtgccctaaatctcccgatggaccgatgaccattcatcccagcagcctc
atgagtccgcctaagagactgcctcacaggcctctgccgccgaggactccgccatgtcta
aaccctggtgccaactggctggtgtactggctgaagcagaagtcttcggacatgtttctg
atcgatgtcactcttgtgtactcgctgcctttgctgttcttcggggagttgaatatttcg
gaaaccgagcaaaacgaaccaaactattgctacgtatggataacgtgttacagagtcaaa
atgttaaaagagactgcaaagcttctctttcaactaaggtcgctactggaccaagtccta
gcatccaagattatggtccgaagtaagcactctactacacataactccgattttgaggag
aaagttctgaacgccgtaatagaggttataacggcggaagacgagcgagctgaataccta
gacggaggcactgaatcagatacctccgaaagtgattccagatactaa
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