Ostrinia nubilalis (European corn borer): 135079410
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Entry
135079410 CDS
T10851
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135079410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onu03041
]
135079410
Spliceosome [BR:
onu03041
]
Complex B
Other components
Prp19-related factors
135079410
Complex C
135079410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
RRM_occluded
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_10
RRM_PARP14_3
RRM_7
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
135079410
NCBI-ProteinID:
XP_063830140
LinkDB
All DBs
Position
16:11322554..11325151
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AA seq
408 aa
AA seq
DB search
MAVSKSTNTYNRQNWEDSDFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKIQDDLPRNEVNKEYYIQN
LDSQMSKFDSTQPSNSALKSKGASDLLLRLARTAPYYKRNRPHVCSFWVKGECRRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVAEKLMRRAAAMPALPPPEDRTVTTLYIGNLP
DNITEEELRGHFYQYGEIRSLTLVPRAQCAFVQYTTRSAAEHAAEKTFNRLVIGGKRLTI
KWGKSQGRQGINDKNEPAPVLEPVPGLPGTLPPPPAFLHPFPPQMPPPPNRPNDFFNLHH
YGGPAAWGGWAGGVPPPAPPPPAPLPLHYPSQDPARLGAHAHANTPQT
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatcgaaatcaactaacacttacaatcgtcagaattgggaagattccgatttt
cccattttgtgccagacctgtcttggagataacccctatattcgaatgacaaaagaaaaa
tatggcaaggagtgtaagatatgtgcacgtcccttcactgtattccgctggtgccctgga
gcgaggatgcgtttcaagaagactgaaatctgccaaacgtgctcaaaactgaagaatgtc
tgtcaaacttgtcttctagaccttgagtatgggcttccaatccaagtgcgagatgcagca
ctcaaaatccaagatgatcttccacggaatgaagtgaataaggagtattacatccagaac
ttagatagtcagatgtctaagtttgattctacgcaacccagcaactctgctctcaagtct
aagggagcatcggacttgttgttgcgcttagcgaggactgccccatactacaagagaaac
agaccccatgtgtgttcattctgggtgaaaggagaatgcaggagaggcgaagagtgccca
tacagacacgagaagccaacagatcctgatgatcctcttgcagaccaaaatatcaaagac
agatactacggtgtgaatgatcctgtagcagagaagctaatgcgtagagcagctgccatg
ccagcgttgcctccgccagaagacagaaccgtcactaccctctacattggcaacttacct
gataacatcactgaagaggagctccgaggacatttctaccaatatggagaaattagatcg
ctgaccttggtgccgagggcgcaatgtgcgttcgtccagtacacaacaagaagcgctgca
gagcatgctgctgagaagactttcaacagacttgttattggaggaaaacgccttaccatc
aaatggggcaaatcgcaaggacggcaaggcatcaacgacaagaacgagccagcaccagtt
ttggagcctgttcctggactaccagggactctgccaccaccgccggcgttcctacatcca
ttcccgccacagatgccacctccgccgaatcgtccgaacgacttcttcaatctgcaccac
tacggcgggccggccgcttggggtggttgggcgggtggtgttccgccaccagcgccgcca
ccacctgcacctcttccgttgcactaccctagccaggatcccgctcggttgggcgcccac
gctcacgcaaatacaccccagacctag
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