Entry |
|
Name |
|
KO |
|
Organism |
onu Ostrinia nubilalis (European corn borer)
|
Brite |
Messenger RNA biogenesis [BR:onu03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135080185
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
17:1031246..1045918
|
AA seq |
991 aa
MDEIEYKLNTNNSVLVVNAVEKLISLIKAKFKPADRKKFVLENEELKFLRGKCSARGTVV
SLTACQGLLALVELGVLEIGHTMSTIVTLLPTASNYSAIISTMAGLLILDLKSRLVPGQP
YKCQFSLKSPQHPFITVLEKNKAVEDEILTQMHALCTHPDYIVSSNSLELLRPVFLWLAI
QPGRGARAWPLLLALPPSSAHLSLLLSCLSCQRICSPLSVERAYDAYAAVAATAINRCDR
AYVVALLPMLARISNELIKHGRDPRPCYSLMERCVGTEAAELRNVASLTLMLLADNLPLT
SALYLHELFNLCLNIASKYKCSSISLSAFVALSLQWLHMPSYLTSSALKVGAKILDLYQS
NDFEDRLDMPNLRTNKIFDELNNIDGRLNTMFKLTEIWERIRDSEDSLKSWLEAIERVDG
AMKLEMVVFLIAVAMERREEKWYEEIVVRALRIVVDTVDIKKELSVLLLPILTYKIARDK
SPLVRMECLKALPLMARTKENVPSIVAVLTKLRTGKGVSTSTLITLYASLAETQVRCFPY
LQELLAESVVGRPDELKWEMDVAKAAAVSRICETRPSTHGLELVPTISSVLNRCTDKAGS
ASTALVLGALAALWRGAAVAPPGTWRALEPKLARDNRLTVQISICKLLSEVPTLRVDTPE
YDRLVSDAARKLWSYMADSHQPAMVEAACDALANYNVEDFKLKDIPEIYRSTVKLPASYC
KTPADAARKPEDVLDYIPCEVWPEVFKYTNQEALSGVERLCTALVAREVRGFRSGVYQPD
ARTEPHNMSYLPNTSVLRGLMDCFKKQRVEGTHGLLQDAVKIEFSVVGLYLRGFRSGAYQ
PDARTEPHNMSYLPNTSVLKGLMDCFNKQPDARTEPHNMSYLPNTSVLRGLMDCFKKQRV
EGTHGLLQDAVKIEFSVVGLYLRGFRSGAYQPDACTEPHNMSYLPNTSVLRGLMDCFKKQ
PDARTEPHNLSYLPNTSVLRGLMDCFKKQVK |
NT seq |
2976 nt +upstreamnt +downstreamnt
atggatgaaatagagtataagctgaacaccaacaatagcgttttggtggtgaacgcggtt
gagaagctgatatccttgataaaagcaaagtttaaaccggctgatcgaaagaagtttgtt
ttggagaatgaagagctgaagtttttgagaggaaaatgttctgcaagaggtacagtggtc
agcctgacggcgtgtcaagggctgctggcgctggtggagctgggagtgctggaaattggc
cacacgatgtcgacgattgtcacgttgctaccgactgctagcaactactcagccataatc
tcgaccatggctgggctcctcatcctggacctgaagtcccggctggtcccgggtcagcca
tacaagtgccagttctccttgaagtctccgcagcacccattcatcacagtactggagaag
aacaaagcagttgaggatgagatcctgactcagatgcatgcgttgtgcacacacccggat
tatatagtgtcgtccaacagcttggagttgcttcgtccggtgttcctgtggctggccatc
caaccagggcgcggcgcccgagcctggccgctgctgctcgcgctgccgccgtccagcgcg
cacctcagcctgctgctgtcctgcctgagctgccagcggatctgcagccccttgtccgtg
gagcgtgcgtacgacgcgtacgccgcggtggcagccacggccatcaaccgctgcgaccgc
gcgtacgttgtggcgctgctgcccatgctcgccaggatatctaatgagctcataaagcat
ggtcgcgatcctcggccatgctacagcctgatggagcgctgcgtgggcacagaagccgcc
gagcttcgcaacgtggctagtctgacactcatgctgctagccgacaacctacctctcacc
tcggcactgtatctacacgagctcttcaacttgtgcctgaacatagcgagcaaatacaaa
tgctccagcatttctctcagcgcattcgtggctctctccctccaatggcttcacatgccg
tcctacctcacctcctctgccctcaaagttggcgccaaaatacttgacctctaccaatcc
aacgacttcgaagaccgactggacatgcccaacttgagaacgaacaaaattttcgatgaa
ttaaacaatatagatggcagactgaacacgatgtttaaacttaccgaaatatgggagagg
attagagatagcgaggatagcttgaagagttggctggaggctatcgagagggtggatgga
gctatgaagttggagatggtggtgtttctgatagcagtcgctatggagaggagagaggag
aagtggtatgaagaaatagttgtgagggcattgcgcatcgtcgtggacactgtagacata
aagaaggagctatcggttctcctcttaccgatcctcacgtacaagatagcccgcgacaag
tcgccactggtccgcatggagtgcctcaaagcgctgccccttatggccagaactaaagaa
aacgtgccgagtatagtcgcggtgctgactaagctaaggactggcaagggtgtgtctaca
tcgactctaatcacgctgtacgcgagccttgctgagacacaggtccggtgtttcccgtac
ctacaagagttgctggcagagtcggtggtaggtcgccctgatgagctgaaatgggaaatg
gatgtggccaaggcggctgccgtcagccgcatttgtgagaccaggccatccacccacggc
ctggaattagtcccgaccatatcgtcagtgctcaaccgctgcacagacaaggcgggctcg
gcgtcgacggcgctagtgctgggcgcgctggcggcgctgtggcgcggcgccgccgtggct
cccccgggcacgtggcgcgcgctcgagcccaagctggccagggacaacaggctcaccgtg
cagatcagcatatgcaagctcctctcagaagtgcctaccctccgcgtggatacgccggaa
tacgaccgcctcgtatcggacgcggctcgcaagctgtggagctacatggcggattcccat
caacctgccatggtggaagcagcttgtgacgcgctggctaactacaacgtggaagacttt
aagctgaaggacattcctgagatatacaggagtacggtgaagctaccagcttcgtactgc
aagacgccggccgacgcggcgcgcaaacctgaggatgtgctcgactacataccttgtgag
gtgtggccagaggtcttcaaatacacgaaccaagaagccctaagcggggtggagcgtctc
tgcacggcgctggtagcgcgcgaggttcgagggttccgtagcggcgtctaccagcccgac
gcgcgtacggaaccccataatatgagctacctgcctaacaccagcgtgttgaggggactc
atggactgcttcaagaagcagcgtgttgaggggactcatggattgcttcaagatgcagtt
aagatagagttcagtgtagtgggactatatctgcgagggttccgtagcggcgcctaccag
cccgacgcgcgcacggaaccccataatatgagctacctgcctaacaccagcgtgttgaag
ggactcatggactgcttcaataagcagcccgacgcgcgcacggaaccccataatatgagc
tacctgcctaacaccagcgtgttgaggggactcatggactgcttcaagaagcagcgtgtt
gaggggactcatggattgcttcaagatgcagttaagatagagttcagtgtagtgggacta
tatctgcgagggttccgtagcggcgcctaccagcccgacgcgtgcacggaaccccataac
atgagctacctgcctaacaccagcgtgttgaggggactcatggactgcttcaagaagcag
cccgacgcgcgcacggaaccccataatctgagctacctgcctaacaccagcgtgttgagg
ggactcatggactgcttcaagaagcaggtcaaatag |