Ostrinia nubilalis (European corn borer): 135080938
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Entry
135080938 CDS
T10851
Name
(RefSeq) probable nucleoporin Nup54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135080938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onu03019
]
135080938
Messenger RNA biogenesis [BR:
onu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135080938
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Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_a-b
Nup54_C
SRP54
DUF8429
Motif
Other DBs
NCBI-GeneID:
135080938
NCBI-ProteinID:
XP_063831731
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Position
2:6145559..6159722
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AA seq
582 aa
AA seq
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MAFSFGASTGTTQSAPFGSAAKPTFSFGSTNTATTSNAGFSFGTSTTSSGFGSLGATSTA
APFGGLGTAPASTAPSLFGGTGFGNTTSKPATGFGTGGFGTNTFGTGTTFGAGTSTFGST
APTFGTNTLGSNTLGSNTFGTSTFGTGSTFGTGSTFGSAFGTKPATTGFSGFGAGLGTNT
FGQPQQQQQQQQPAGPASAHEALIAAVFNCNVFGDERDQVLAKWNLLQAQWGTGQAYYSR
NSPALELNEQNPLCRFKAVGYSRLGGREDKEGHVALTFNKTEQEIKNNQQALITSLSGLL
GNKPNLTVNIDAVKNVLENKSQVVIFVVDKNAGGSHVSASELAAFLNAGAARTALAGAGC
SAVTPVTRPSPQMLQNYLQTPPPGMDMRLWKQAQADNPDPDNYIPVPIIGFSEIKFRASC
QAEQAGLQASWLRKASDTLGELRTRRAAAAARLSQLAARLHGLRHTLLQVIARQETLNHV
GVALSPEEEAARARLHELASQLAAPPLYNGRLNELLCAVRLQRSASAGTSQERYQLDPGA
QEDVKQFLTMQQRGMAHLLDTARQDLAALNAISEGMARLVRA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggctttttcttttggtgcttctacaggtaccacccagagtgcccctttcggctctgca
gctaaaccaacattctcatttgggagtactaatactgccactacctcaaacgctggattc
agttttggaacctccacaacttcctctggctttggttcattgggagcaactagtacagct
gcaccttttggaggcttagggacagctccggcgtctacggcaccatcattatttggtgga
actggctttggaaatacaacatctaaacctgcaacaggctttggaactggtggatttggt
accaacacatttggaacaggtacaactttcggagctggtacttctactttcggcagtaca
gccccaacatttggtaccaacacacttggttccaacacgcttggctccaacacatttggc
acttcaacatttggtactggatcaacatttggtactggatcaacatttggttctgcattt
ggaactaaaccagctaccactgggtttagtgggttcggcgctggtcttggaaccaacaca
tttggacagcctcagcagcagcaacagcagcagcagccggccgggcccgcgtcggcgcac
gaggcgcttatcgcggcggtgttcaactgcaacgtcttcggggatgagcgcgaccaggtg
ctggccaagtggaacctcttgcaggctcagtggggcactggacaagcttactatagtcgg
aattctccagcactggagctgaatgagcagaacccattatgtcggttcaaagcagtgggg
tattcaagactgggcggtcgggaagacaaggaaggtcacgttgctttgacgttcaacaag
acagaacaagaaatcaagaataatcagcaagcactcatcacatcactatctggtttgttg
ggtaataaaccaaacctcactgttaacattgatgcagtgaaaaatgttttagaaaacaaa
agtcaggtggtgatattcgtcgtagacaagaacgccgggggttcccacgtgtccgcgtca
gaactagccgcgttcctgaacgcgggcgccgctcgcaccgcgctcgccggcgccggctgc
tccgccgtcacgcccgtcacccggccctcgccgcagatgctgcaaaactacctgcagacg
ccgccgccaggaatggacatgcgactttggaagcaagcacaagcagacaatcctgatcct
gataactacattcctgtgcctatcattggtttttccgagataaaattccgcgcaagttgt
caagctgagcaagctggcttgcaggccagttggctgcgtaaagcgagcgacactttgggc
gagcttcggactaggagggccgccgccgccgcccggctgtcccaattggctgcaaggctg
cacgggttgagacacactttgttacaagttatagcgcgccaagagacactgaaccacgtg
ggagtggcgcttagccccgaagaagaagcggcgcgggcgcgcctccacgagctagcctca
caacttgccgcgccgcctctatacaatggtcgcctgaatgagctgctctgcgcggttagg
ctgcagcgcagcgccagcgcgggcacatctcaagaacgctatcagctagatccgggcgcg
caagaagacgtgaagcaattcctgacgatgcagcagcgcggcatggcgcatctcctcgac
accgcgcgccaggatctcgccgctctcaacgcgatctccgaaggcatggcgcggcttgtt
cgcgcctag
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