Ostrinia nubilalis (European corn borer): 135081882
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Entry
135081882 CDS
T10851
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135081882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onu03400
]
135081882
DNA repair and recombination proteins [BR:
onu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
135081882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
135081882
NCBI-ProteinID:
XP_063832736
LinkDB
All DBs
Position
20:8019932..8032989
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AA seq
1231 aa
AA seq
DB search
MSKRNSAGAANTLFNYFTKTPPANKKFKANDDAGGSPKLDSSVNKEKDKKVEKKKRERQP
TPSPEVNNHDSDEEVPIASKRRKRIRLNPMDSDDSDVENKADNKVEEKEKISLEKKLQDS
FKYEPNQSPKASKAKAKTPSSKGPAATPSKSEVQEEATLDEGNWTHCKLEWLKPEKIRDA
KKRRPDHPDYDPSTLFVPPDFMNEQTPAHRQWWEMKSSHFDCVLFFKVGKFYELYHMDAA
VGVNELGFSYMKGAFAHSGFPESAYSRMASTLVSKGFKVARVEQTETPDMMQDRCKKMGH
STKWDKVVRREICQVAVRGAQVCGLQDAGPADAGASYMMAIAEEEGSSCSQFGVCFLDTS
IGIFHLGQFQDDKHSSRLLTTLAHYPPVLVIYDRKSTTPRVSKLLSTHCHSARREPQSLW
PPEKTLKILAEKYYKTNADGDWPEGIKPYLHEALRLKILAEKYYKTNADGDWPEGIKPYL
HEGKGLFSMHCHTAGREPQDSRYLLRSITRPMLTATGRSAGLKPQFLWPPEKTLKIFAEK
YSKTNVDGDWPEGIKPYLHEGDALGLTPAAHCSLAIKALGGCVSYLTDCLLDIQILGMSQ
FETYAPPDVLNKTLSQEEKAENRWEGGNTMVLDAITLRNLRIVQDDGCLYEKLNFCSTAM
GKRWLYQWVCAPSCSLAVIKERQKAVKCLFESQELCQEAKNILTTLPDLERLLAKVHALG
NLKRSKHHPDARAIFYEEKTYSKRKVLDFISVLNGFTAALKLIELFEDVESGLLKRITQF
SPSGQFPDYRDTLKFFKEAFNQKEAEKEGRILPGEGVDQEYDNTLRLIGDIEKELKEYLS
EQEKYFKCRLSYVGSDKKRYQIEVPQGAASRAGGDYQLEGTRKGYKRFSTAETKDLLARM
IAAEDQKTTVLKDLSRRIFEKFSSTYDQWESAVKCISTLDILLSFTEFARQQSGDICLPE
VTFDSNQKPYINITEGRHPCIPIVNDFIPNDTKLGVEGASLLLLTGPNMGGKSTLMRQVG
LLTVLAHLGSYVPAQECRLSLVDRIFTRLGASDDILSGQSTFLVEMNETAAIVKHATTHS
LVLLDELGRGTSTYDGTAIASGVCAELARRGPRTLFSTHYHSLVQHFAADPGVLLGHMAC
MVETDESTADNEDHIPEETITFLYKLSPGACPKSYGFNAARLAGIPKEITRRAHQVSKNL
EKEATCVRAFRDLIKMSDVKEMRQLLASLSI
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgtaacagtgctggagcagctaatactctttttaattattttaccaaaaca
ccaccagctaacaagaaattcaaggcgaacgatgatgccggcggcagtcccaagttagat
tcctctgtaaacaaagaaaaagataaaaaagtggaaaagaaaaagcgcgaaaggcagcca
accccttcgccagaggtgaacaatcatgacagtgatgaggaggtgccgattgcctcaaag
aggaggaagaggatcaggctcaaccccatggattctgatgactcggatgttgagaataaa
gcagacaacaaagttgaggagaaagagaaaatctctttggagaagaagctacaggatagc
ttcaaatatgagcccaaccaatccccaaaggctagtaaggccaaggccaagacacccagc
agtaaaggaccagcagcaactccatccaaatctgaggtgcaagaggaagccacattggac
gaaggcaactggacccactgtaagctggaatggctgaagccagagaagatcagggacgca
aagaagcggagaccggaccatcccgattatgaccccagcacattgttcgtgccacccgat
tttatgaatgaacagactcctgcccaccgccagtggtgggaaatgaagtcttcccacttt
gactgtgtgctgttcttcaaagtgggcaagttttacgagttgtaccacatggatgcagct
gttggggttaatgaactaggattctcttatatgaagggagcatttgcccattccgggttc
ccagaaagcgcgtattcccgcatggcttccacactcgtgtccaaaggattcaaggtggcg
agggtggagcagaccgaaacgccggatatgatgcaagataggtgtaagaagatgggtcac
agcacaaaatgggacaaggtggtgcggcgcgagatatgccaggtggcagtgaggggagct
caagtctgcggcctgcaggacgccggcccggccgacgcgggcgcttcgtacatgatggct
attgcggaagaggaaggctcgagttgcagccagttcggcgtgtgtttcctggacacttcc
atcggcatcttccacctgggccagttccaagacgacaagcactcctcgcgactgctcacc
acactggctcactacccgcctgttctggtaatatacgaccgtaagagcacaacgcctcgc
gtgagcaaactgctcagcacacactgtcatagcgcgagacgcgaacctcaatccctatgg
ccgcctgaaaagacccttaaaatacttgctgagaagtattacaagaccaacgccgatggt
gactggccggagggaatcaaaccctatttgcatgaagcgctaagactcaagatactcgct
gagaagtattacaagaccaacgccgatggtgactggccggagggaatcaaaccctatttg
catgaaggtaagggtctatttagtatgcactgtcataccgcgggacgcgagcctcaagac
tcaagatacttgctgagaagtattacaagaccaatgctgacggcgactggccggagtgcg
ggactcaagcctcaattcctctggcctcctgagaagactctcaagatattcgctgagaag
tactccaagactaatgttgatggtgactggccggagggaatcaaaccttatttgcatgaa
ggcgacgccttaggcctcactccggctgcccactgctcgctagcaatcaaagcattaggc
ggctgcgtctcatacctcacagactgtctgctagacatacaaatactgggtatgtcccag
ttcgaaacctacgcgccgcctgacgtgctaaacaaaaccttatcgcaagaggagaaagcc
gaaaatcgatgggaaggcggcaacacgatggttttggacgcgatcacgctaaggaatctg
aggatagtgcaggacgatgggtgtttgtacgagaaattgaacttctgttccacggctatg
gggaaaagatggttataccagtgggtgtgtgcgccaagctgtagcctggccgtgatcaaa
gagcggcagaaggccgtcaagtgtctgttcgagagccaagagctgtgccaagaggccaag
aacatcttgaccactctgccagacctggagaggcttttggccaaagtccacgccctaggc
aacttgaaacgttcaaaacaccatcctgacgctcgcgccatcttctacgaagagaagacc
tactccaaacggaaggttctggacttcatatcggtgctgaacgggttcactgctgcgctg
aaattgattgagttgttcgaagatgtggaatcgggactgttgaagagaatcacacagttc
agtccgagtggacagttcccggattatagggatactttgaagttcttcaaggaagccttc
aaccaaaaggaagcggagaaagaaggccgcattctgcccggcgaaggagtggatcaagag
tacgacaacacgctgcggctcatcggcgacatcgagaaggaactcaaggagtatctcagt
gagcaggagaaatattttaagtgccgactctcctacgtggggtcagacaagaagcggtat
caaatcgaagtcccgcagggtgccgcaagccgtgccggcggcgactaccagttggaaggc
acgaggaaagggtacaaaaggttctccactgctgagactaaggatttgcttgcccgcatg
atagcagccgaagaccagaagaccacagtactaaaggaccttagccgcagaatattcgag
aagttctcctcgacgtacgaccaatgggagtcggccgtcaagtgcatatctacattagac
atactactatcatttacggagttcgctcgccaacagagcggcgatatatgcctgcctgaa
gtcacctttgatagtaatcaaaagccgtacataaacataacagaaggacgccacccgtgc
ataccaatcgtgaacgatttcataccgaacgacaccaagcttggagtggaaggcgctagc
ctgctgctgcttaccgggcctaacatgggaggaaagtcaaccctgatgaggcaggtcggc
ttgctgaccgttcttgcacatttgggtagctacgtgcctgcgcaagagtgccgcttgagc
ttagtagaccgcatcttcactcggctgggcgcgtccgacgacatactgtcgggccagtcc
accttccttgtggagatgaacgagacagccgccattgttaaacacgccactacacattcg
ttggtgctacttgatgaactggggcgtggcacatcgacatacgacggcacggcgatagct
tcgggcgtgtgtgcagaattagcgcggcgcgggcctcgcaccctgttctcgacgcactac
cactcgttggtacagcacttcgcggcagaccctggcgttttgttgggccatatggcctgc
atggtcgaaacggacgagtcaacagccgacaacgaagaccacatccctgaggaaaccata
accttcctatacaagctgtcccctggcgcgtgtccaaaatcctacggtttcaacgcggct
cgcctcgctggaatccctaaggagataaccagaagagcgcaccaggtatctaaaaacttg
gagaaggaagccacgtgcgtgagagcctttagagatctgatcaagatgagtgatgtcaaa
gaaatgaggcagcttttggcttctttgagcatttaa
DBGET
integrated database retrieval system
