Ostrinia nubilalis (European corn borer): 135082021
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Entry
135082021 CDS
T10851
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
onu Ostrinia nubilalis (European corn borer)
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
onu03009
]
135082021
Enzymes [BR:
onu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135082021
Ribosome biogenesis [BR:
onu03009
]
Eukaryotic type
Pre-60S particles
Helicases
135082021
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
MRP-S26
Transformer
Motif
Other DBs
NCBI-GeneID:
135082021
NCBI-ProteinID:
XP_063832840
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All DBs
Position
21:1134405..1140050
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AA seq
602 aa
AA seq
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MVNKLWSKVDPPLSKPVLNCIQKQDFSAMTPIQAAVIPLLITCKDVAAEAVTGSGKTLAF
VVPMLEMLMKREKLDGPLRKDYIYALVISPTRELAVQIFKVIEQFLQEPELAHFTISLMV
GGRSIETDVESLKNGAQIAVCTPGRMMDLLTEQRNLNLPSRMKELEFLVLDEADKILGFG
FQGTLSAILQYLPRQRRTGLFSATQTKDLQDLIRAGLRNPVIVSVKEKPSISTPILLENY
YVIVEPQDKFLFLLNFIRNRKMVKGLFFLPTCACVDYWASVLPAFLPDKKIFAIHGKMKH
NRNNILESFRKTENTILLCTDLMARGLDIPQVEWVLQWEPPTSPAAFVHRVGRAARGGAA
GCSLMPLLPTEDAYVPFIRTNQLVELKDWRESKDQIKISDKLKDKVLSLLHSQQLRDRAI
LERGARAFVSHIRAYSKHECNLLLQLKQLPLGHIAASYGLLRLPAMPEITQEHKDQFVGP
KEKIDFDSIPYLDKQREALRLQRLEEQKRTGVRRPAKQKKKMVKTTPWANAKQNKVERKE
RKQKRKEQKQKVEAAGKKRAKKRKAVTAEEIAELAEDVALLKKLKKRKITEEQFDKAFDL
EA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacaaattgtggtctaaagttgaccctcctctctcaaaaccggtgctcaactgc
atacagaagcaggattttagtgcgatgacaccgattcaggccgcagttattcctcttcta
ataacttgcaaagatgttgcggcagaggctgtgacgggttcagggaagaccttggccttc
gtagtgcctatgctggagatgcttatgaagcgggagaagttagatggccctttacggaaa
gactacatttacgctctcgtcatctcgccgacgagagagctagctgtgcagatatttaag
gttatagagcaatttctccaagagccagaactagcacacttcactatttccctgatggtg
ggaggtcgcagtattgagactgacgtagagagcctgaagaatggagcacagattgcagtg
tgtacgcctggacggatgatggacttactgacagagcagcggaacttgaacttacctagc
aggatgaaggaactggaattcctagtcctagatgaagctgacaaaatcctaggttttggc
ttccaaggcactctgtccgccatcctgcagtaccttccacgacagaggcgcactggcctc
ttctccgccacccagaccaaagacctccaggacctcatcagagctggcctcaggaaccct
gtcatagtcagtgtgaaagaaaaaccttccataagcacaccgattctgctcgaaaattat
tacgtcatcgtagaacctcaagataagttcttgttcttattgaactttatacggaatcgg
aagatggtgaaaggtcttttcttcctgcccacttgcgcgtgcgtcgattattgggcgagt
gtgttgccagcgttcttgcctgacaagaagatatttgcgattcatggaaaaatgaagcac
aatagaaacaacatattggagagcttcaggaaaacagaaaacactattttgctgtgcaca
gacttaatggcaagaggcctagacatccctcaagtggagtgggtgctccaatgggagcct
cccacgtcccctgctgcctttgtccaccgcgtggggcgcgcggcccgcggcggcgccgcc
ggctgctcgctgatgccgctcctgcctactgaagacgcgtatgtgcccttcatcaggacc
aatcagttagtggaactgaaagactggagggagtcgaaggaccagatcaagatcagtgac
aagttgaaggataaggtgctgtcgctcctgcactcgcagcaactccgcgatcgggcgatc
ctcgagcgtggagcacgcgccttcgtctcccacatacgagcctactccaagcacgagtgc
aacctgctgctgcagctgaagcagttgccgctgggacacatcgcggccagctacggcctg
ctgcggctgccagccatgcctgagattacgcaggagcacaaagaccagttcgtggggccc
aaagagaagatagacttcgacagcatcccgtacttggacaagcagagagaggcgctccgg
ctgcagcggctggaggaacagaagaggacgggcgtgcggcggccggctaagcagaagaaa
aagatggtaaaaaccacgccatgggcgaacgccaaacagaacaaagtagaacgcaaagag
cggaagcagaagagaaaagaacagaagcagaaagtggaagcggccggcaagaagcgagcg
aaaaagcgcaaagcggtcacggcagaagaaatagcagaattggccgaagacgtcgcgctg
ttgaaaaagctaaagaagagaaaaataacagaagaacagttcgataaggcgtttgatcta
gaagcgtga
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