KEGG   Ostrinia nubilalis (European corn borer): 135082640
Entry
135082640         CDS       T10851                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
onu  Ostrinia nubilalis (European corn borer)
Pathway
onu03030  DNA replication
onu03410  Base excision repair
onu03420  Nucleotide excision repair
onu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:onu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    135082640
   03410 Base excision repair
    135082640
   03420 Nucleotide excision repair
    135082640
   03430 Mismatch repair
    135082640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:onu03032]
    135082640
   03400 DNA repair and recombination proteins [BR:onu03400]
    135082640
Enzymes [BR:onu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     135082640
    6.5.1.6  DNA ligase (ATP or NAD+)
     135082640
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     135082640
DNA replication proteins [BR:onu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    135082640
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     135082640
DNA repair and recombination proteins [BR:onu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     135082640
   NER (nucleotide excision repair)
    Other NER factors
     135082640
   MMR (mismatch excision repair)
    Other MMR factors
     135082640
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DUF3798 FERM_N_2
Other DBs
NCBI-GeneID: 135082640
NCBI-ProteinID: XP_063833501
LinkDB
Position
22:13206688..13226911
AA seq 900 aa
MLSFSKLIVQFRFLVNCTHLPVTRKVISQVSISNNYFYGRNRIMAQKTIMSFFSSAPKKP
VKLEQEVIHDEETDSNSDQSSPPANGKEKRSSKRQRLESNSSGSASEEASPPDKRRKSKR
LRIESSGSETGPSPKSSPMKVEKSAGPPKTYNSPKSKKPKAKVDLSLLPKKETNKRKSSP
TSELKVKEEVTSPTVKSEKAIKKEESVSPDSKKEESVSPVSKTESTDSEKKEDKVVPETE
YNPAKSKYHPIRDACWSRGQEVPYLALARTLEAIEGTSARLKMVEILSNFFRSLLALSPE
DLLPCVYLCLNQLAPAYHSLELGIAETYLMKAVAQCTGRSLAQIKSAAQKCGDLGSAAQS
ARATQRTMFAPPPLRCRRVLRALKDVAELTGHASVNKKIAKIQSLFTACRHCEAKYLIRS
LEGKLRIGLAEQSVLQALALATATTPPAPGGATVLDASRGLPSDEFKARVDAHALTIKST
YCACPNYDALIPALLQYGVAALPEHCKLTPGVPLKPMLAHPTRGVHEIFNRFENEQFTCE
WKYDGERAQIHVPANEDGSAPDLSRAAIFSRNQEDNTSKYPDILRRLPGLLRENVTSCVL
DCEAVAYDVAAKKILPFQVLSTRKRKDAREEDIQVQVCVFAFDLLLLNGRSLVAAPLAER
RRLLREHCREVEGEWHFATSKDCSTMEEVQQFLDEAVANSCEGLMVKTLTGDHARYDIAR
RSHNWLKLKKDYLEGVGDTLDVVVIGGYRGRGKRAGAFGGFLLACYEPEQEVYQALCKIG
TGFSDEDLQTLSKELEQHVIEAPRNYYSYDRSHEPDAWFSAALVWEVRCADLSLSPAHRA
AIGLVDHDKGISLRFPRFVRVRTDKTPEQATSAQQVAAMYLAQDQIKNQAAKPANLDDFY
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgttaagtttcagtaagttaatcgtgcaatttagatttttagttaactgtacacatttg
ccggtaacaagaaaagttatctcacaggtttccatttcaaacaattatttttatggaaga
aataggatcatggctcaaaaaaccataatgagtttcttctcctctgctccaaagaaacct
gttaaattagaacaggaagttatacatgatgaggagacagactctaatagtgatcaatca
tcaccaccggctaatggaaaggaaaagaggtcctccaaaagacaacggctagagagtaac
agcagtggctcggcaagtgaagaggcttcacctcctgataagagaaggaaatcaaaaagg
ctaaggattgagagctctggcagtgagacaggaccttctccgaaatcctcaccgatgaaa
gtagaaaagagtgctggaccaccaaaaacatacaactctcctaaaagcaaaaagccaaaa
gccaaagtggacttatcactgttaccgaagaaggaaactaacaaacggaaaagttctccg
acatctgaactcaaagttaaagaagaggtgacttccccaactgtcaaaagtgaaaaagca
attaaaaaggaggagagtgttagtcctgatagtaagaaggaggaaagtgtaagtccagtt
agtaagacagaaagtacagacagtgagaaaaaggaggataaagtagttccagaaacagaa
tacaacccggccaagtccaagtaccacccgatcagggacgcgtgctggtcgcgcggccag
gaggtgccgtatctggcactggcgcggacactcgaggccattgagggcacatcagctcgt
ttgaagatggtggagatcctcagcaacttcttccgctcgctgctggcgctgtcgcccgag
gacctgctgccgtgtgtctacctgtgcctcaaccagctcgcgcccgcctaccacagcttg
gagctaggcatagcagaaacatacctgatgaaggcagtagcgcagtgcacgggccgctcg
ctggcccaaatcaagagcgcggcgcagaagtgcggcgacctgggctcggctgcgcagagc
gcgcgcgcgacgcaacgcaccatgttcgcgccgccgccgctgcggtgccgccgcgtgctg
cgcgcgttgaaggacgtggctgagcttactggtcacgcctcagtgaacaagaaaatcgcc
aaaatacagtcgctgttcacagcttgcaggcattgtgaagccaaatatttgattaggtcc
ctagaaggcaagctccgcatcggtctagcagagcagtcagtgctacaagcgctggcatta
gccacggccacgacgccgcctgcacccggcggcgcgactgtgttggatgcctcgcgcggc
ctgccgtccgacgagttcaaggcgcgcgtggacgcgcacgcactgactatcaagagcacg
tactgcgcgtgcccgaactacgacgcgctcatacccgcgctactgcagtatggtgtagca
gccctgcccgagcactgcaagctgacgcccggcgtgccgctcaaacccatgctggcgcat
ccgacgcgcggcgtgcacgagatattcaacagattcgagaacgagcaattcacgtgcgaa
tggaagtacgacggcgagcgcgcacaaatacacgtgcccgcgaatgaagacggcagcgcg
cccgacctttcgcgcgccgccatcttcagccgcaaccaggaggacaacaccagcaagtac
ccggacattctgcggcggctgccgggcttattacgtgagaacgtgaccagctgcgtgctg
gactgcgaggccgtggcctacgacgtcgccgccaagaagatcctgcccttccaggtgctg
tcgacgcgcaaacgcaaggacgcgcgcgaggaggacatccaggtgcaggtgtgcgtgttc
gccttcgacctgctgctgctcaacggacgctcgctcgtggccgcgccgctcgccgagcgc
aggcgattgctacgcgaacactgccgcgaggtcgaaggcgagtggcatttcgcgacgtcc
aaggactgcagcaccatggaggaagtacagcagttcctggacgaagctgtagccaactcc
tgcgaggggctcatggtcaagaccttgacgggtgaccacgcgcggtatgacatcgcgcgc
cgttcgcacaactggctgaagctaaagaaagactacttagaaggcgtgggcgacactcta
gacgtggtcgtgatcggcggctaccgcgggcgcggcaagcgagccggcgccttcggcggc
ttcctgctggcctgctacgagcccgagcaggaagtctaccaggcgctctgcaagatcggc
accggcttcagcgacgaggacctccagacgcttagtaaagagctcgagcaacatgtcatt
gaggcccccaggaactattacagctacgaccgcagccacgagccggacgcgtggttctcg
gcggcgctggtgtgggaggtgcgctgcgccgacctgtcgctgtcgcccgcgcaccgcgcc
gccatcgggctcgtcgaccacgacaagggcatctcgctgcgcttccccaggttcgtgcgc
gtacgcacagacaagactccggagcaggcgacgtcggcgcaacaagtggccgccatgtac
ctggcgcaagatcagatcaagaaccaggccgccaagcccgccaacctcgacgacttctac
tga

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