Ostrinia nubilalis (European corn borer): 135084377
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Entry
135084377 CDS
T10851
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135084377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onu03019
]
135084377
Messenger RNA biogenesis [BR:
onu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135084377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
135084377
NCBI-ProteinID:
XP_063835224
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Position
2:complement(13035769..13045740)
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AA seq
489 aa
AA seq
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MADAAVETAPGDENDDSWLYGDSNAEQAANNDAENSEKTQVQSNADVGEDKEQEDNDANN
DDSHFNDEHFADVGLTGDQEQANGDADSQDNGDSDSDDSDDVKVTIGEIKSGPQAYASLN
IKRGVGLVAAGAEKPRQGTATGSKVTLEDLDGPGSINGVPALEFNIDTIEDKPWNKPGAD
ISDYFNYGFNEVTWSAYCERQRRMRVGEAGVGLHVVPPRAPPPDMRRPPGPIRSDDGPPV
MPNNYQVRENTIQVMTAERREYGRGHTRDAPEYFPAPPPDHYYPPPAAYDEPSWGHPEPS
GWAPSEIKELTPGPAMGPPSMGPPPMGLAPPPGHMAPPPHMLGAPPFAPPYRHLPPHDRE
RDRDRDRDRDRERDRDRDRMRERDERERSHRRDDEDRDRERDRERDRSRSIKPDRIREKS
YRRERSRSRSRRHKSRSRSPRMRERSRDRERSRDRERERERSRDRDRSRDRERSVKPKTK
ENKEKEDEK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctgctgttgaaactgctccaggcgatgaaaacgatgatagttggttgtac
ggagactcaaatgcagagcaagctgcaaacaacgatgcagaaaatagtgagaaaacccag
gttcaatcgaatgctgatgttggagaagacaaagaacaggaggacaacgatgccaacaac
gatgattcgcatttcaacgatgagcactttgctgacgttggtctgacgggggaccaggag
caagccaacggggatgccgacagccaggacaacggagactccgattcggacgacagtgac
gatgtcaaagtcactatcggagaaatcaagtcggggccgcaagcgtatgccagtttgaac
atcaaaagaggagtaggcctggtagcagcaggtgcagagaagccccgccaagggactgcc
actggcagcaaggtgacgctggaggacctcgatgggcctggcagtatcaatggagtgccc
gcacttgaattcaacattgacaccattgaagataaaccatggaataagcctggtgctgat
atatctgactacttcaactacgggttcaacgaggtgacgtggagcgcgtactgcgagcgg
cagcggcgcatgcgcgtgggcgaggccggcgtaggcttacacgtcgtgccgccgcgcgcg
ccgccgccggacatgcggcgaccgccgggtcccattagatccgacgacggtccgccagtg
atgccaaataactaccaagttcgggaaaatactatacaggtgatgacggcggagcggcgc
gagtacgggcgcgggcacacgcgcgacgcgcccgagtacttccccgcgccgccgcccgac
cactactacccgccgcccgccgcctacgacgagccttcctggggtcacccggagccgtcg
ggctgggcgccgagcgagataaaggagctgacgcccggcccggccatgggcccgcccagc
atgggcccgccgcccatgggcctggcgccgccgcccggccacatggcgccgccgccgcac
atgctgggcgcgccgcccttcgcgccgccctaccgccacctgccgccgcacgaccgcgag
cgcgaccgcgaccgcgacagggaccgcgacagagagcgcgaccgagaccgcgacagaatg
agggagagggacgaacgcgagcgcagtcacaggagagatgacgaagacagagatcgcgaa
agggatagggaacgcgaccgctcgaggtctatcaaacccgacagaattagagaaaagtcc
tacagaagagaacgatctcgctctcgttcgcgccgccacaagtcgcgctcgcggtcgccg
cggatgcgcgagcgctctagagaccgcgaacgttcccgggacagggaacgcgagcgcgaa
cgctcgcgcgaccgcgaccgctcgcgcgacagagagcgcagcgtcaagcctaaaaccaag
gagaacaaagaaaaagaagatgagaagtaa
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