Ostrinia nubilalis (European corn borer): 135084810
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Entry
135084810 CDS
T10851
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K11644
paired amphipathic helix protein Sin3a
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135084810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
onu03036
]
135084810
Chromosome and associated proteins [BR:
onu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
135084810
REST complex
135084810
Heterochromatin formation proteins
Other heterochromatin formation proteins
135084810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
HHD_RTEL1
PAH_ZNF598
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
135084810
NCBI-ProteinID:
XP_063835620
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All DBs
Position
27:7635499..7684441
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AA seq
1387 aa
AA seq
DB search
MMKRTAVPRLGPDEPSPLPTQSPAQIQQAGASNMHTLAQSTSIAQPQLLDTLRTGATAML
SVSSVGGVGNVGVGSAFGRAGPRGAGPAVINYLKAGAVQYAAAKPPQPQVPPRLKTRRDK
SVWAAPRGAGPAVINYLKAGAVQYAAAKPPQPQVPPRLKSVWAAPRGAGPAVINYLKAGA
VQYAAAKPPQPQVPPRLKSVWAGPRGAGPAVINYLKAGAVQYAAAKPPQPQVPPRLKLFE
HQPHQPHQPHQPHQPMPGRVSPNPAQPGAQFQRLKVEDALSYLDQVKYKFNTQPQVYNDF
LDIMKEFKSQTIDTPGVITRVSNLFKGHPELIVGFNTFLPPGYKIEVQSNGQVSVSMPSP
TGMGGGMVLGVHHTPPQPHLVQLLPVQPASPPLLSVPQSVNSAIVHNLSVTPGNTLHHIS
QAHQQIEAASIHHTPGTVAPPAGSGGHPASAPPGQPVEFNHAIEYVNKIKSRFSRQPDKY
KRFLEILHAYQRGHRDVKEPQAKQQTEQEVYSQVAKLFENQDDLLAEFGQFLPDAKAVTK
PHYAHARSPPPPQQRVDSEPERERERERFCVSPPHAHAPHAAPHAAPHAAPHHHPQQVSK
HPAPAAAPPQHLKRSPSFTSSTQIAVGAPPAKKSRVSGLSGAGVRDVTYAEAAKYGTHHE
YSFFDKARKALRSQHVYDNFLRCLLLFTNEIISSSELLCVTGPFLCRHPELQKWLQDFVA
PASPPHTPPAMMHTGYNNTSYPNTNSLLSYDRERDRTDRNDRGDRSDRDNRDKCVRYEPV
GHLGAQLRHDRPQGDAAMDIDLSTCKRLGTSYCALPRDAAARRCSGRTALCKEVLNDTWV
SFPTWSEDSTFVTSRKTQYEEYIYRCEDERFELDVVIETNAATIRVLEGVQKKLARMSAD
DAARHRLDDCLGGHSPTIHQRALRRIYGDKAVDIIAGLKKNPVVAVPVVLRRLKAKEEEW
REAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDLKAMRSKTLFNELESAYAARRPGPHL
SLDYAVRGRHEAIKILRDCTELLIHHARRQTAIQKAEKRRIKQLLRQFLPDLFAHPRQPL
SDDERDEEEKIDPPSPGSPAEPADEKTNNGSNVKQEKQESSESDAASDKSSRNNKNDKEN
KPKNNNNTDSKEPVSATNSVKRSSSNEDTSIKNDIKQESDLDYRDHPPNEARFVCTSSWY
LFLRLHAAVCQRLAGALRTASALADAERRAARHPSVATALRLKPNNLPADVTSPADYYNA
LLELVKGVLDGNTEPAAYEDAAREMLGIKAYPAYTLDKLVSIAVRQLQHCVSEPWSVRAA
ELCARDGMRGPLGYVRRAARYLRHDHNAFLVKVVSILVMFARARFRCKYSLDAEKKTRAR
GPYYCCS
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgaacggccgtgccgcggctcgggcctgatgagccctcgccgctgccaacc
cagtcgccagcccagattcaacaagctggcgcgagcaacatgcatacacttgcgcaatct
acttcaatagcccaaccccagttgcttgacacgctgcgcacaggcgctacagccatgctc
tcagttagcagcgtgggcggcgtgggcaacgtgggcgtgggctccgcgtttgggcgggcg
gggccccggggcgcgggccctgctgtcatcaactacttgaaggcgggggcggtgcagtac
gccgccgctaaaccgccgcagccgcaggtgccgcctaggctgaagactcggcgtgacaag
agtgtttgggcggcgccccggggcgcgggccctgccgtcatcaactacttgaaggcgggg
gcggtgcagtacgccgccgccaaaccgccgcagccgcaggtgccgcctaggctgaagagt
gtttgggcggcgccccggggcgcgggccccgccgtcatcaactacttgaaggcgggggcg
gtgcagtacgccgccgctaaaccgccgcagccgcaggtgccgcctaggctcaagagtgtt
tgggcggggccccggggcgcgggccctgccgtcatcaactacttgaaggcgggggcggtg
cagtacgccgccgctaaaccgccgcagccgcaggtgccgcctaggctgaagctcttcgaa
caccagccgcaccagccccaccagccgcatcagccccaccagcccatgccgggccgggtg
tcgccgaaccccgcccagcctggtgcccaattccaacggcttaaggtcgaagatgccctg
tcgtatctggaccaggtcaaatacaagtttaatacgcagccccaggtgtacaacgacttt
ctggatatcatgaaggagtttaagagtcagactatcgacaccccaggcgttatcactcga
gtgtcgaatctcttcaagggccatcccgagttaattgtgggattcaacacgtttctgcca
cccggatacaagatcgaagttcagagcaatggacaggtatcagtctccatgccgtctcct
accggcatgggtggcggcatggtgctgggcgtgcaccacacgcctcctcagccgcatctg
gtgcaactgctgccggtgcagcccgcctcgccgccgctgctgtctgtgccgcaatcggtg
aacagcgctatagtccataacttgtctgtgactcctgggaacacgctgcatcatatatcc
caggcacatcagcagattgaggctgcgtccattcaccatactcctggtactgtagcgcca
ccggctggcagcggtggacatccggcctctgctcctccggggcagcctgtggagttcaat
catgctattgaatacgtcaataagattaagtcgcggttctctcgccaaccggacaagtac
aagcggtttttggagatactccatgcttaccagaggggtcatcgtgatgttaaagaacca
caggctaaacagcagacggaacaagaggtgtattctcaggtggcaaaactattcgagaac
caagacgacctgttggctgaattcgggcagttcttacctgacgccaaggcggtcaccaag
ccgcattatgcccacgctcggtcgccgccgcctccacagcaacgcgtggacagcgagccg
gagcgcgagcgcgagcgcgaacgtttctgcgtgtcgccgccacacgcgcacgcgccgcac
gccgcgccgcatgccgcgccgcacgccgcgccgcatcatcatccgcagcaggtgagcaag
cacccggcgccggccgccgcgccgccgcagcacctcaagaggtcacccagcttcacctcc
tccacgcagatagccgtaggcgcgcccccagccaagaaatcccgcgtgtccggcctaagc
ggcgcgggcgtgcgtgacgtcacgtacgcggaggcagccaaatacgggacgcaccacgag
tatagcttcttcgacaaagctaggaaggcgctgcgctcgcagcatgtttatgacaacttt
ttgagatgcctgctcctcttcaccaacgagatcatctcatcctcggaactgctctgcgtg
acgggtccgttcctgtgccgacatccggaactccagaaatggttacaagacttcgtggcg
cccgcatcgccgcctcacacgccgcctgccatgatgcatacaggctacaacaacaccagc
tacccgaacaccaacagcctgctgagctacgaccgcgagcgcgaccgcaccgaccgcaac
gaccgcggcgaccgcagcgaccgggacaaccgggacaagtgcgtccgctacgagcccgtg
ggacacttgggggcgcagctgaggcacgacagacctcagggcgacgccgctatggatatt
gatctgtcaacgtgcaagcgtctgggcacgtcatactgtgcgttgccgcgggacgccgcc
gcgcgccgttgttctggccgcacagcgctgtgcaaagaggtattgaatgatacctgggtg
tcgttcccgacttggagcgaggactcgacgttcgtgacgtcacgcaagacccagtacgag
gagtacatctaccgctgcgaggacgagcggtttgagctggacgtggtaatcgaaaccaac
gcagccaccattcgcgtattagaaggcgttcagaagaagctcgctcggatgagcgcagac
gatgcagccagacaccgtctggacgactgcctgggcggacactcgcccaccatccaccag
agggcattacggcgcatatacggcgataaggcggtggatatcatagcggggctgaagaag
aaccctgtggtagccgtgccggtggtgcttaggcggctgaaggctaaggaggaggaatgg
agggaggctcagaagggcttcaacaagcaatggcgcgagcaaaacgagaaatactacctg
aagtctttagaccatcagggcatcaacttcaagcagaacgacctcaaagcgatgcgctcc
aagacattattcaacgagctagagagcgcttacgccgcgcgccgaccgggcccacatcta
agtttggattatgctgtgcgaggaagacatgaagcgataaagatcctccgagactgtacg
gagctactcatacaccacgccagaaggcagacggcgattcagaaggcagaaaagcgaaga
atcaagcagttgttaagacagttcttgccggatctgttcgcgcatcctagacagccgttg
agcgacgatgagagggatgaagaggaaaaaatcgacccgccaagcccgggcagtcccgct
gagcctgccgacgaaaaaaccaacaacgggtcgaatgtcaagcaagagaagcaagagtca
tcagaatctgatgccgcatcagacaagagcagcaggaacaacaagaatgacaaagaaaac
aaacctaagaacaacaacaatacagatagtaaagagccagtgagtgcaacaaacagcgtg
aaacgaagcagcagcaacgaagacacgtccataaagaacgacatcaagcaggagagtgat
ttggactacagagatcacccgccaaatgaggcgcgcttcgtctgcacatcgtcgtggtat
ctattcctgcggcttcacgcggcagtgtgccagcgactggccggagccctacggactgcc
tcggccttggcggacgcagagcgccgcgccgccaggcaccctagtgtggctacggcatta
cggcttaagcctaacaacctaccagcggacgtgacctccccagcggactattacaacgca
ctcctggagctggtcaaaggagtgttagatggcaacactgagccggcggcctatgaggat
gccgcgagggagatgttgggcatcaaggcgtatcctgcgtatacgctggataaactggtg
tctatcgctgttaggcagctgcaacactgtgtgtcggagccgtggtcagtgcgcgccgct
gagctgtgcgcccgggacggtatgcgcgggccgctgggatacgtgcgccgagctgccaga
tatctgcgacacgaccacaacgcgttccttgttaaagtcgtgagtattcttgtgatgttt
gctagagcaagatttaggtgcaaatattcgctagatgccgaaaaaaaaactagggcccga
ggtccttactactgttgtagctag
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