Ostrinia nubilalis (European corn borer): 135084852
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Entry
135084852 CDS
T10851
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
onu Ostrinia nubilalis (European corn borer)
Brite
Enzymes [BR:
onu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
135084852
Chromosome and associated proteins [BR:
onu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135084852
BRITE hierarchy
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GFIT
Other DBs
NCBI-GeneID:
135084852
NCBI-ProteinID:
XP_063835658
LinkDB
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Position
27:complement(2993977..3002142)
Genome browser
AA seq
1899 aa
AA seq
DB search
MGPDRYLVEVLHYRSPHLIWVEVVSENKEYNYEQLGIYGILPFENTIDLESGKESTVYQR
CRDWVPAVTLMMQETFADAKEVWFCPTHIDRRNSIFDDNIHKYGEITIIKKDKQLFDLSK
VLTKSGLAIENIVLFHQELSLGNLNTKLDHLRTQEVVKEIEKHIALKPSKKREESVKKHT
TVFQAAQNLESMLTSRNLERHNEFHLSGVKIDHYMKIKSKDFDKCKDIDEVSVGRASHVS
KSVVDEPTLEPTPEPTKLPKFLQKKLELSRKPCLKSANDPMQVLLATKKYLEENAVKIDD
HRNNSEDGSFSNAEDKKKIDDHRNNSEDLSSNTGDKNATPNVGDAPEKPVMVDKRTNTGK
GYFLRRHKRVLKNKKNEIIFFKSYGPPGMSPNTRTLKEKTKDEQEEQDEKLVSNTEDRKE
VANELEFFDDVDSHIELEITNKDNLKEMHKQNPPKDTEVNKNDSFDSTDKSLNESNCSTD
SKRRHEGLQKFSAMRKKLELLKNKSKSDVSFSSDSYKDSSSDINASQTKRNKAEFLDSDD
DTLTDLVEKISVEYRPKCLKTDVKPKETVKVIPNAIKNNVNPFKNVDADMSVFVDKLVSP
VLMVHCKNDKRIEPCSNIRDIHFNDHIHVVLKNYGVERPMMLQMVSWPVILRGYSFFMIS
PKNSGKTLGYLPAVCRLISDFRSEFVDSVGPTCIIVCATAQSVSEVEKLAKMMLALEEKV
VACYPGMDELHMTTSLLNGCDLFICTPSVLVRLLQLTDFGIDLRRLSTFVLEDCERLSQV
YSNEVKFFLVKIKEMLKNRANKEMKVQFVVLSRVWCDFLEPLAKKSPNSVICIGAFQECV
LYSKASTSVDFVKKENKKGKVLEYLKEIDGTKSTVIVCRSDDEVDDLKNELTKNKNVVFS
CDNKMTVEDLYNLSKAWHDYQEPLLGPILVCCDGNLNHLNVTNAHHLIHYSLPGLFSMFC
KRFSVLNDNYSSIFKTENEAVKIKVFLEDSNVEQLPKILNFIKRCTDQVPEFLDKICETI
LHEKDAVKAKNLVPICCNLLEYGECPDYWNCHDRHAVFKNCDEPKDWMPKNGVVTFKILH
YLTPLHYSARLLSNITKGQTRKYPQAYSSLSLKLGMYFSHERNQRLHGIPKVGDVCAVSV
KINFFVRCQVLKILSKYNNGTPNEVLIKLIDEEKLEKSRDIYLYYLPEEFKSFESHVVQV
RLVNICPRDKDITFSNEAKKMLMKITKEDEDLYLRGQVVLTVGNCIFVDTLEACQELTSL
NETVVRYNFKKELLDKHAIANPEHIGKLEKLCEGCIERKDERDAIPEESVIKQKKDKATP
QWAHLEQDMTEVFFASADDPNTLFLRLVKFESCMKLMLKDIEKHVTEKPEPVSQVAKGDI
VLAKFPDDSTYERARVEEILSQSLAKCFFVDQGDWRDVLLKDLVDIPDKFIKQLPFQAIE
CSLIGIKPVGENWTDYAINWLCDKCETNSGDPKQLYVKYFTKEESTFTGGNKYGVAIVDT
YGDGDVAINKLMVDLNLAQETEEMEYLDQLVLNKPVEPTTCKETSDNEFEEVSKTDDNVD
SQALVPAQDYRLSDLFPEKPIRSVPLVGSDDDSDGSWSIHDPHEFLPMVKDYFDHIKNMN
QGKNENDAQASTSTKVDEKPKETKKDDTQAGTSTNVDEKPTETKKDETQAGTSTKVDEMP
TETKKDEAEMIAKKNADLSEAVDESNAVKSLSTTLDSDDLSSAEGTQVSEKNEKTNPPID
LIVDELRKPKLCWRQNKTSVTIKIQLIGVENYDLDVKERSIKFDAVSNDTQYGFDIELYG
VIDGKSVVHSNKGQYILLKMNKVMKKNWLSLTKDNAIKKWIVYDVDNLDASSEEEENYRD
TLADVMKGIHNRESDSESDEDFLDDLGYEYKRDIDSLKG
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggggcctgaccgctacttagtggaggtcctccactatcggagcccccatttgatatgg
gttgaagtagtctcagaaaataaagaatacaactacgaacaactaggaatatacggtatt
ctaccctttgaaaatactatagacttggagagcggtaaagaaagcaccgtttatcagcga
tgtcgagattgggtgccggctgtaactttaatgatgcaggaaacgtttgctgacgctaag
gaagtatggttttgcccgacacacatagatcgcagaaattcaattttcgatgacaacatt
cacaagtacggtgaaatcaccataataaagaaagataaacagctattcgatctttcaaaa
gttctaactaaatcagggcttgctatcgagaatatagttcttttccaccaagaactgagc
cttggcaatctcaatacgaagcttgaccatttacgaacacaagaagtcgtaaaagaaatt
gagaagcacatcgctttaaaaccaagtaagaagcgtgaagaatcagtgaaaaagcatacg
acagtctttcaggccgcacaaaatttggagtctatgttaacgtcaaggaatttggaaagg
cataacgagtttcatttatccggtgtcaaaatagatcactatatgaaaattaagtcgaag
gactttgataaatgtaaagatattgatgaagtatcggtcgggagagctagccatgtcagc
aagtcagttgtggatgagccaaccctggagccaacccctgagccaacaaaactgccaaag
tttttacaaaagaaactggaattatcgaggaaaccctgcctgaaatcggccaatgatccc
atgcaagtgttgttggccactaaaaagtatttggaagagaatgctgtgaaaatcgatgac
caccgaaacaattctgaggatggttcctttagcaacgcagaagacaagaaaaaaatcgat
gaccaccgaaacaattctgaggatctctctagcaacacaggagacaagaacgcaactcca
aatgtaggagacgcacctgagaaacctgtaatggtggacaaacgaacaaacactggaaaa
ggctatttcttacgcagacacaagagagtgttaaaaaataagaagaatgaaatcatcttt
ttcaaatcctacggtcctccggggatgagtccaaacactaggacgctaaaagaaaaaaca
aaagacgagcaagaagaacaagacgaaaaactggtgagcaataccgaagatagaaaagaa
gtcgcgaatgaattggaattttttgatgacgttgattctcatatcgaattagaaattacc
aataaagataatttaaaagaaatgcacaaacaaaacccaccaaaagataccgaagtaaac
aaaaacgatagttttgacagcaccgataaaagtctcaacgaatcaaactgttccacagat
tcaaaacgcagacatgaagggttgcaaaagttttctgccatgcggaaaaagttagagcta
cttaaaaataaatcaaaaagcgacgtttctttttcatctgattcttataaagattcttcc
agcgatataaacgctagccaaactaaacggaacaaagctgagtttctagattctgacgat
gatacattgactgatttagttgagaaaattagtgtagaatatcgtcctaaatgtctaaaa
actgatgttaaacccaaagagacagtaaaagttattcccaacgcaattaaaaacaatgta
aatcctttcaaaaacgtagatgcagacatgtctgttttcgtcgataaactagtgtcccca
gttttgatggtccattgcaaaaatgataagcgaatcgagccttgttctaatattagggac
atacactttaacgaccatattcatgtggtgttaaagaattatggcgtcgaacgccccatg
atgttgcaaatggtctcttggccagtgattttgaggggctacagtttctttatgatcagc
cccaaaaatagcggtaagacgttaggatatctgcccgcagtgtgcagactcatctctgat
tttaggtcggaattcgtggatagcgttggccctacttgcatcatagtttgcgcgaccgca
cagtccgtttctgaggtcgaaaaactagccaaaatgatgttagccttggaagaaaaagtc
gttgcttgctatcctgggatggacgagcttcatatgaccacgtccttgctgaacggttgt
gatttgttcatttgcactccgtctgttctggtcaggttattgcaacttactgatttcggt
attgatctaagacggctctctacttttgtcctcgaagattgtgaaaggttgtcccaagtg
tattccaacgaagtcaaatttttcctcgtcaaaatcaaggagatgttgaaaaatcgggcc
aataaagagatgaaggtgcaattcgtggtcctatcccgtgtctggtgtgactttctcgaa
ccactcgcaaagaaatcaccgaattcagttatatgtatcggggcttttcaggaatgcgtc
ttgtactctaaggctagcacttcagtcgactttgtcaaaaaggagaacaagaaaggcaaa
gttttggagtatttgaaagaaattgacggtaccaagagtacggtaattgtatgtcgctca
gacgatgaagtcgatgatttaaagaatgagctgacgaagaacaaaaatgttgtgttttca
tgcgacaacaaaatgactgttgaagatttgtacaacttgagcaaggcctggcacgattac
caggaaccgttgttaggtccaattctggtatgctgcgacggtaatttgaaccatctaaac
gtgacaaatgctcatcatttgattcactattcgttgcctggactgttctcgatgttttgc
aaacggttctccgttctgaacgacaactactcctcgatttttaagactgagaatgaagct
gtcaaaataaaagtattcttggaagacagtaacgtggaacagttgcctaaaatcctcaat
ttcatcaagcgctgcaccgaccaagtgcccgaattcttggacaagatctgcgagactatt
cttcacgaaaaagacgctgtgaaagctaaaaatcttgtgccaatctgctgcaatttgctc
gagtatggcgagtgccctgattactggaattgccacgaccgtcatgctgttttcaaaaac
tgcgacgagcccaaagattggatgcctaaaaatggtgtggtcacttttaaaatcctgcac
tatttgactccactgcattattcagctcgattactgtcgaacataactaaagggcagacg
cgtaaataccctcaagcttacagcagtctttctctcaaattgggtatgtatttcagtcac
gagagaaatcaaagattacacggcatacccaaagtaggcgatgtgtgcgcggtctccgtg
aaaattaatttcttcgtccgctgtcaagtgctaaagattttgtccaaatacaacaacgga
acaccaaatgaggtccttatcaagctcatcgacgaggaaaaattagaaaagtcgcgagat
atatacttgtactacctgccggaagaatttaagtcgttcgagtctcatgtagtccaagtg
aggctggtaaatatctgccccagggacaaagatataacgttttcgaacgaagcaaagaaa
atgcttatgaaaatcacaaaagaagacgaagacctttatttgagaggccaagtcgtcttg
actgttggaaactgcatcttcgttgacaccctcgaagcttgccaagagctgacgtcattg
aacgaaactgtcgtcagatataatttcaaaaaggaattgttggataaacacgccattgcc
aatccggaacacattggcaagttggagaaactctgcgaaggttgcattgagcgtaaggac
gaaagagatgcaattccagaagagtcagttataaagcagaagaaagacaaagccacgccc
caatgggcccatttggagcaggacatgactgaagtattcttcgcgtcagctgacgatcct
aacacactctttttacgtcttgtcaaattcgaaagctgtatgaagcttatgctcaaagat
atagaaaagcacgtcaccgaaaaaccagagcccgtgagtcaagttgctaagggagatatc
gtgctggcaaaattcccagacgattctacgtacgaaagggcgagagttgaagaaatattg
tcgcaatccttagcaaaatgtttcttcgttgaccaaggagattggcgcgatgttctatta
aaagatctagtggatatcccggacaaattcataaagcagttgccgttccaagcgattgaa
tgcagtttgattggaataaaacccgtcggagaaaactggactgattatgcgattaattgg
ctttgtgataagtgcgagacgaacagcggagatccgaaacagctgtatgtaaaatacttc
acgaaagaagagtccacatttaccggagggaacaaatacggagttgctattgtcgatact
tacggcgatggagatgtagctataaataagttgatggtagacctgaatttggctcaagaa
accgaagaaatggaatatctagaccagcttgtacttaacaagcctgtggaaccgacaacc
tgtaaagaaacgtcagataatgagttcgaagaggtgtcaaagacagatgacaatgtagat
tcccaagctcttgttcctgcacaggactatcgattatctgatttgttcccggagaaaccg
atcaggtcggttcctttagtgggttcggatgacgattctgacgggtcttggtcgatccac
gaccctcacgagtttctaccaatggtaaaagattactttgaccacataaaaaatatgaat
caaggaaagaacgaaaatgatgcacaggcaagtacttcaacaaaagttgatgaaaagcca
aaagaaaccaaaaaagatgacacacaagcgggcacttctacaaacgttgatgaaaagcca
acagaaacgaaaaaagatgagacacaagcgggcacttctacaaaagttgatgaaatgccg
acagaaaccaaaaaagatgaagcagaaatgattgcaaagaagaatgcagatttgtcagaa
gcggtcgacgaatcgaacgcggttaaaagtctatcaaccacgctagattctgacgattta
tcgtcggctgaaggcacgcaagtatcagaaaagaatgagaaaactaatcctcccatcgat
ttgatcgtagacgaattgcggaagccaaaactgtgttggcgacagaataagacatctgta
acgattaaaatccaactcataggcgttgaaaattacgatttggatgtgaaagaacgctcg
attaagttcgatgctgtatcgaatgatactcaatatggttttgatatcgagttgtacggg
gtaatcgacggcaaaagtgttgtgcatagcaataaagggcagtatatactgctgaagatg
aataaggttatgaagaagaactggctgtctctgaccaaagataatgccataaagaaatgg
attgtctatgatgtggataatctagacgcgtcatcggaagaagaggagaattatagggat
actttggcggatgtaatgaaggggatccacaatagagaaagcgattcggagagcgatgaa
gactttcttgatgatttaggctacgaatataaacgagatatcgattcgctgaaaggataa
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integrated database retrieval system
