Ostrinia nubilalis (European corn borer): 135085348
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Entry
135085348 CDS
T10851
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
onu Ostrinia nubilalis (European corn borer)
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onu03019
]
135085348
03041 Spliceosome [BR:
onu03041
]
135085348
Messenger RNA biogenesis [BR:
onu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135085348
Spliceosome [BR:
onu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135085348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
135085348
NCBI-ProteinID:
XP_063836205
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All DBs
Position
28:2086701..2169385
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AA seq
376 aa
AA seq
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MLTMSTLMMPAATMTTMTNAGPIPVAAATKLEPAKLLQLPHPALMQQLPQQPPHHHQHQH
NNNNKEHYHIFVGDLSPEIETQSLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKS
EAEAAITSMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGG
LTTGLTEELMQKTFQPFGTIQEIRVFKDKGYAFIRFSTKESATHAIVAVHNTDVNGQPVK
CSWGKESGDPNNAQGQGQLGGTAYSPFGAAYTAGGVPPTSYWYNTYPQQLGGFLQGVQGV
QGYSYAGQFAGYQQQYMGMGGVQLPWALGGGVGGVGSVGGVAAMSQPPQVLHYPVQHFQV
QPQIGEDEWLAPSLLV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatgtctacgctcatgatgcctgctgctaccatgaccacgatgaccaacgct
gggccgatcccagtggctgctgcgaccaagctggagccagccaagctgctccagctgccg
catccagctctgatgcagcagttaccgcaacagccgccgcatcatcatcagcatcagcac
aacaataataataaagagcattaccatatcttcgtgggtgacttgagtccagaaattgag
acgcagagcctcagagatgccttcgcgccttttggagaaatctcggactgcagagtagtg
cgggacccgcagactctaaaatccaagggctacgggttcgtgtcgtttttgaagaaatcg
gaggcggaggcagccattacctccatgaatggccagtggctgggatccaggtccatccgc
accaattgggccaccaggaaaccaccagcgccgaagaatgaattgaactccaagccgctt
accttcgatgaagtgtacaaccagagctcgcccaccaactgcacggtctactgcggtggt
ttgaccaccggcctcactgaagagctgatgcagaagaccttccagcccttcgggaccatc
caggagattagagtcttcaaggacaagggatacgcctttattagattttcaacaaaagag
agcgccacccatgccatagtggcagtccacaacacagatgtcaacgggcagcctgtcaaa
tgctcgtggggaaaggaatccggtgaccccaacaatgctcagggtcaaggacagctcgga
ggcacggcatacagcccattcggcgcggcgtacactgctggtggggtgcctccaacctct
tactggtacaacacgtacccgcaacagctgggaggcttcctgcaaggggtacagggggta
caagggtactcgtacgctggacagttcgcggggtaccagcagcagtacatgggaatgggc
ggcgtccagctgccatgggcattgggcggcggcgtgggcggtgtaggctcggtcggcggc
gtggcggccatgtcgcagccgccgcaggtgctgcactatccggtacagcatttccaggtg
cagcctcagatcggcgaggacgaatggctggctcccagcctcctggtgtga
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