KEGG   Ostrinia nubilalis (European corn borer): 135085356
Entry
135085356         CDS       T10851                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
onu  Ostrinia nubilalis (European corn borer)
Pathway
onu03018  RNA degradation
onu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:onu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135085356
  09123 Folding, sorting and degradation
   03018 RNA degradation
    135085356
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:onu03019]
    135085356
   03041 Spliceosome [BR:onu03041]
    135085356
Messenger RNA biogenesis [BR:onu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135085356
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     135085356
Spliceosome [BR:onu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    135085356
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 135085356
NCBI-ProteinID: XP_063836214
LinkDB
Position
28:complement(1902534..1903150)
AA seq 141 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDTQIKARGRSEVSKGRGGGQNMRTGGRGTGRGAFGNRGR
PGPLNRGGGNAGRNPQNKNKK
NT seq 426 nt   +upstreamnt  +downstreamnt
atgttaccattatcgctattacgaacggctcaaaaccacccaatgttggtggagttgaag
aatggcgaaacatacaacgggcatttagtttcttgtgataactggatgaatatcaacctc
agagaagtgatctgcacgtcgcgggacggagacaagttctggaggatgccagaatgctac
attcggggcagtacgatcaaatatttgaggattcctgacgaggtgatagacatggtgaaa
gaagatacgcagattaaagcaagagggcgaagcgaggtgtccaagggccgtggtggaggc
cagaacatgaggactggtggccgagggaccggcagaggcgctttcggcaaccgcgggcgg
ccaggacctctaaacagaggtggcgggaacgcaggccgcaatccacagaataaaaataaa
aaataa

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