Ostrinia nubilalis (European corn borer): 135085951
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Entry
135085951 CDS
T10851
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135085951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onu03041
]
135085951
Spliceosome [BR:
onu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
135085951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
PRP4
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
135085951
NCBI-ProteinID:
XP_063836805
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Position
30:complement(6363740..6412728)
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AA seq
536 aa
AA seq
DB search
MSDDEDVVLVKKSKQVHYGSLEEQEKARLAALAAAAREGTEDNGGKELGDIQISNEYMEL
EEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAIHKKMEEEEARIERDRGREGTWYHEGPPELRDARLWIARYSLPRAKQRLTK
AREDLQLAGSVRAAAKQDSQRKASAISIYCSQIGDTRPISFCRFSSDSQMLITSSWSGLS
KVWSVPDCTPLQVLKGHSCNVSSAVFHPQAALPNHFRDKVRIKNTKEGTSDTPEAMEADE
KSAACTMASCAYDGTVYLWNFSSEAPMASLDGHGPSRVSRAEFHPSGRFLATTVFDHSWR
LWDLETATEVLHQEGHAKPVYSVAFQIDGSLAVTGGMDAFGRVWDLRTGRCVMFLEGHLG
PVLGADWAPAGHQLATAAADHQTKIWDLRRRAILYTIPAHTHLVSDVRYQRSHGHFLLTS
SYDKSAKLWSNPAWHPLRTLSGHDNKVMSADISYDNKYIATCSFDRTFKLWAPDLS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgaggatgtggtattggtaaaaaagagcaagcaagtccactatggatcc
ttggaggaacaggagaaggctcggctggcggcactggcggctgcagccagagaaggaacg
gaggataatggcgggaaagaacttggagacatacaaatttcaaatgaatacatggagctt
gaagaagagatgtctcgtgacaaaaaagcactgctcgaagaattcgagcggagacgcaaa
gctcggcagctgaatgtgtctactgacgatgatgaggtacgcagaagtcttcgtcagctc
ggtgagccggtgtgcctcttcggtgagggtccggcagagaggagagttcgcttgagggac
ttgcttagttacctcggcgaagatgcaatccacaagaaaatggaagaggaggaggcccgt
atagagagggacagaggtcgcgagggcacgtggtaccacgaaggacctccggagttgagg
gacgcgaggctgtggatcgctcggtatagcttgccgagggccaaacagaggcttactaaa
gcccgtgaggacctgcaactggccggaagcgtgagggcagcagcgaaacaggactcccag
agaaaggcctccgccatctccatatattgcagccagataggcgacactcggccaatcagc
ttttgcagattcagtagtgacagccaaatgctgataacttcaagttggtcaggactcagc
aaagtctggtcagtaccggactgcacgccgctgcaagtcctcaaaggccactcttgcaac
gtcagcagcgctgtgtttcacccgcaggccgcgctgcctaaccactttagagataaggta
cgtataaagaacaccaaagaaggcacatcagatacgcctgaagcgatggaagccgacgaa
aagtctgccgcgtgcaccatggcgtcctgcgcctatgacgggaccgtgtatctgtggaac
ttcagcagcgaagccccgatggcgtctctagacgggcacggcccatcccgcgtgtcccgc
gcggaatttcacccttcgggacgattcctggccactacagtttttgaccactcctggcgg
ctatgggatttggagaccgcaactgaagttttgcatcaagagggacacgcaaaacctgtg
tacagtgtcgccttccaaattgacggctccctcgctgtgactggtggcatggacgcgttc
ggtcgcgtctgggatctccgcacggggcgctgcgtgatgttcctggaggggcacctgggg
cccgtgctgggcgccgactgggcccccgccggccaccagctcgccaccgccgccgccgac
caccagactaaaatctgggacctcagacggagagcgatactgtacaccataccagcgcac
acgcatctagtcagcgatgtaaggtaccaacgcagccacggtcatttcttactgacgtca
tcgtacgacaagtcggcgaagctctggtccaacccagcctggcatccgctcaggacctta
tcaggacacgataataaggtgatgagcgctgacatatcatacgacaacaaatacatagcc
acatgttctttcgataggacgttcaagctatgggctccggacttatcttag
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