Ostrinia nubilalis (European corn borer): 135087776
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Entry
135087776 CDS
T10851
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135087776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onu03041
]
135087776
Enzymes [BR:
onu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135087776
Spliceosome [BR:
onu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135087776
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Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND_NTPase5
Cas3-like_C_2
AAA_30
T2SSE
nSTAND3
PhoH
DUF5506
Motif
Other DBs
NCBI-GeneID:
135087776
NCBI-ProteinID:
XP_063838635
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All DBs
Position
3:7214613..7218421
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AA seq
886 aa
AA seq
DB search
MDKSSKRHHSSSDSDSAEEFRRKDLKERDEFAKRLKSRDDNKTKKVANASGKKSYEEAAK
RLKLEAEDREKLLPKLRVQSRRKYLVKRKEDKVVELEADIADDEYLFEESILTEREKRER
EHKKTILQLAKEHEKARELENVQRYHMPQDLGKGEKGEYVEVDENEKLPHSEQRKWEQEQ
IKSAFFKFGAKDAKARDEYELLLDEQIDFIQALQLEGTKEKKEEKEKSEYQKMRMSIEET
KKSLPVYPFKESLIEAIKKYQILIVEGETGSGKTTQIPQYLYEAGFTDDSKKIGCTQPRR
VAAMSVAARVAQEMNVKLGNEVGYSIRFEDCTSDRTVIKYMTDGTLHREFLSEPDLASYS
VMIIDEAHERTLHTDILFGLVKDITRFRPDLKLLISSATLDAEKFSSFFDDAPIFRIPGR
RFPVDIYYTKAPEADYVDACVVSVLQIHATQPLGDILVFLTGQEEIETCVEMLQERTKRI
GKKLRELVILPVYANLPSDMQAKIFEPTPEGARKVVLATNIAETSLTIDNIIYVIDPGFA
KQNNFNSKTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYKYELEDNTVPEI
QRINLGNAVLTLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKAGRRM
AEFPTDPMLAKMILASEKYKCSEEIVTIAAMLSVNSSVFYRPKDKIIHADTARKNFFHQH
GDHLTLMNVYNQWVESDYSVQWCYENFIQYRSMKRARDVREQLAGLMERVEIDMVSSIAE
DTNIRKAITAGYFYHIAKFSKGGHYKTVKHNQTVMIHPNSALFEELPRWVIYHELVFTSK
EFMRQVTEIESKWLLEVAPHYYKSKELEDSTNKKMPKTVGKVATNK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggataaatctagcaaaagacaccattcatcgtcagattcggatagcgctgaagaattt
cgacgcaaggatttaaaagaaagagacgagtttgctaaaaggttgaaaagtcgagatgat
aataaaacaaagaaagtcgcaaacgcgtctggtaaaaaatcttatgaagaagctgctaaa
cgattaaaattggaggctgaagacagagaaaagcttttacccaaactgcgagtgcaatct
cgtcgaaaatatctagtgaaacgtaaagaagataaggtagttgagctggaagctgatatt
gcagatgatgagtacctatttgaagaaagcatactaacagaaagagaaaaaagagaaaga
gagcataagaaaactattcttcagttagctaaagaacatgaaaaagcaagagaacttgaa
aatgtccagagatatcacatgccccaagacttgggaaaaggagagaaaggtgaatatgtt
gaagtagatgaaaatgaaaaattaccacattctgaacaaagaaaatgggagcaagaacaa
atcaagtcagcattttttaaatttggtgctaaagatgctaaagctcgtgatgaatatgaa
ctcttacttgatgaacagattgactttatacaagctcttcaactggaaggcactaaagaa
aaaaaggaagaaaaagaaaaatctgagtaccaaaaaatgcgtatgagcattgaagaaacc
aaaaagtcactacctgtctatcctttcaaggaatccctcatagaagctattaaaaaatac
caaatattaatagtagagggtgagactggttcaggtaaaacaacacaaattcctcaatat
ctttatgaagctggttttacagatgatagtaagaaaattggatgcacacaaccacgacga
gtagctgcgatgtctgtagcagctagagttgcccaggaaatgaatgtgaaacttggaaat
gaagttggatatagtattcgatttgaagactgtacttccgacaggactgttataaagtat
atgacagatggaacactacacagagaatttttatctgaacctgatttagcttcttatagt
gtcatgattattgacgaagctcatgaacgcactttacatactgatattctctttggccta
gtgaaagatattactagattcagaccagatttgaaactacttatatcaagtgcaacatta
gatgctgaaaaattctctagtttttttgatgatgctccaatattcagaatcccaggaaga
aggttcccagttgacatctattatactaaagcaccagaagctgactatgtagatgcctgt
gttgtctctgtcctacagatacatgcgactcaaccactaggagacatattagttttttta
accggtcaagaagaaattgaaacatgtgttgaaatgttacaagaaagaaccaaaagaata
ggaaaaaaactgagagaacttgttattttaccggtttatgctaatctgccaagtgatatg
caagcaaaaatatttgaaccaactcctgaaggtgcccgaaaagtagtattggctacaaat
atcgctgaaacatcactcaccattgacaatataatatatgtaattgatccagggtttgca
aaacagaataatttcaattccaaaacaggcatggaaagtttaatggttgttccaatttct
aaagcgtcagctaatcaaagagcgggtagggctgggcgtgtagctcccggcaaatgcttc
agactgtatacagcttgggcatacaaatacgaacttgaagataatacagttccagagata
caaagaataaatctgggaaatgctgttcttacgttaaaggcattgggaattaatgatctt
attcattttgactttcttgacccaccaccacatgaaacactggtgctagcattggaacaa
ttatatgcccttggagcattgaatcaccatggagaattaactaaagcaggacgacgaatg
gctgaatttcccacagatccaatgttagctaaaatgatactagcaagtgaaaaatacaaa
tgttctgaagaaattgtaactattgctgcaatgttatcagtaaacagctctgttttttat
agacccaaagataaaataatacatgctgacacagctcgaaaaaactttttccatcaacat
ggtgatcatttaactttaatgaatgtgtacaaccagtgggtggaatctgattattcagtc
caatggtgttatgaaaacttcatacagtatcgttcaatgaagagagcacgcgacgtacgt
gagcagttggcgggcctcatggagagagtggaaattgatatggtgtccagtatagctgaa
gacaccaacatacgaaaagctattactgcaggctatttttaccacatagcaaagttttcg
aagggtggccattataagactgtcaaacataaccaaactgtcatgattcatcctaacagt
gccttatttgaagagttacctcggtgggtaatctaccatgagttagtatttacttcgaag
gaatttatgcgtcaagtcacagaaattgaaagtaaatggttattagaagttgctccacac
tattataaatctaaagaattagaagactccactaataagaaaatgcctaaaactgttggt
aaagtagcaacaaataaataa
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