Ostrinia nubilalis (European corn borer): 135087852
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Entry
135087852 CDS
T10851
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu04382
Cornified envelope formation
onu04512
ECM-receptor interaction
onu04518
Integrin signaling
onu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135087852
04518 Integrin signaling
135087852
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135087852
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135087852
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
onu04147
]
135087852
00536 Glycosaminoglycan binding proteins [BR:
onu00536
]
135087852
Exosome [BR:
onu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135087852
Glycosaminoglycan binding proteins [BR:
onu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135087852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
135087852
NCBI-ProteinID:
XP_063838751
LinkDB
All DBs
Position
3:complement(9326265..9350123)
Genome browser
AA seq
1801 aa
AA seq
DB search
MSGPARAPPIALRLVPVTLLLLLWNPQLSSAVVCNQTVCNCAGLKGDRGTPGPPGAPGPQ
GDYGEDGPEGRMGRLGLPGDFGERGDYGDKGERGVDGHYGPRGYQGPQGLQGYEGDRGIP
GLDGCSGVDGVVGPPGRRGIPGDRGFPGLEGEKGLPGLAGEGGSNSRGSKGDQGDYGRPG
TPGSPGPEGWRGDSGLPGEEGDQGLMGVRGEAGYRGDYGDDVVGPPGQKGDQGETGEPAR
RPSVIVDNEVQQNITIIAKGYKGEKGLRGQRGEKGIKGITGSVGAPGSPGINGIQGLKGE
QGIDGPRGKPGHRGQDGPPGLKGDKGAPGYVGQDGLDGTPGGRGEDGRPGSPGVQGPMGE
PGIYDPSLNEPLLPGSSGPQGPPGLTGPKGEAGLDGLRGYPGIIGLPGLPGRKGNPGRPG
NPGISPKGEPGNDGFKGLPGPRGPSGYIGLPGPMGVKGFKGATVVGPDGEGGMPGLDGLP
GMRGDRGEPGYMGPAGYPGIGWRVTGPIGEPGEPGPPGPVGEPGRSGRPGFFGPKGERGD
DCPYCKSGLPGAKGQRGDDGFPGLKGVPGPEGLPGARGVNGLPGNSGIPGPKGPKGNKGQ
SGMAGPQGPRGQHGIVKIPPKSLTKADRGPPGDVGFIGRVGLRGDQGWPGHPGDYGPKGI
KGRLGDYGFPGLPGRNGTRGRDGAPGWPGAPADIPAAFLFGEKGDMGLKGDAGEAGDDGT
PGEAGESVGTNLDVKGFKGVVGFPGIKGIRGRKGDRGDMGYDGFPGIRGDAGFPGGTIPG
SVGVRGHRGEKGDFGPYGEPGATGQQGPTGFHAGKGQKGSRGDIGASIIVGERGIDGTPG
EPGDIGEAGYSGSPGRMGIIGPKGEVGPPGDAGFDGPVGPPGRKGIPGIEVQGARGIPGR
PGLPGVVGLIGDPGMQGPHGLQGDEGPKGMKGEAGRRGFRGRPGDEGSIGFPGFPGGIGS
PGLPGEDGDTGEAGPTGFPGRPGRQGLIGAPGIKGFRGDIGLPGPVGMDGWPGLKGEIGD
MGLPGLKGLPGDSGIIGMKGDYGEAGYDGRIGRPGYKGSAGEKGDRGFPGQTVVGDAGLK
GSEGDEGYPGLDGVVGPKGIMGDRGYDGDRGLTGDKGFPGIPGPPGRRGFNGVKGARGYQ
GSIGFKGITGDKGMEGEPGKMGMPGLPGDQGYVGLPGLQGETGPKGERGEPGPSAYLPAS
KGDLGDIGMDGLPGIPGEPGETGYFGLKGNQGIRGDTGETGMTGDSGFDGAKGMIGDIGP
PGLPGLPGQNARQGEKGRPGIDGLPGWPGPMGQKGAPGDFGIEGPIGAPGMPGLVFEGPK
GMKGMDGLPGQRGLPGAPGAPGMEGAPGEPGFKGDIGEPGYAISPKGVQGNPGWDGLVGM
TGLRGDAGDSGSNGYPGPQGLRGLKGEIGDEGQQGPTGSPGPDGIKGDTGDPLPESEILP
GMTGDVGPSGFDGRPGSDGMPGSFGKNGLPGLKGMRGDVGFVGPVGQPGAPGFQGIKGRQ
GERGYEGLRGSIGLPGLPAPPPPVPRSRGFYFTLHSQTSMIPQCPDGTSPLWNGFSLIHI
VANAKAHGQDLGAPGSCLRRFSTMPYMFCNLNNVCDFAQREDYSFWLSTPEPMPMAMTPI
QARDVGSYISRCQVCESPTRTIAIHSQSTDVPSCPNGWERLWIGYSFLMHTAGADAAGQS
LISPGSCLRDFRTRPFIECNGLGRCNYFATAVSYWLSTINDARMFDKPEQQTLKADQVSK
ISRCSVCMRRPPGWNSGQGSFPSGDVNSVPNAVVRRPAYRRPRLRGEYRRGGRLVRGRPR
Q
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcccggcgcgtgcgcctcccatcgcgctccggctcgtgcccgttacgcttctt
cttcttctatggaaccctcagctatcttcagcagtagtatgcaatcaaacagtttgcaat
tgtgccggactgaagggggatcgcggaactccggggccacctggagcgcctggaccgcag
ggggactacggcgaggatggccccgagggtcggatggggagattaggcctaccaggcgac
ttcggtgagcgcggagattacggtgacaaaggagaacggggggtcgatggtcattacggg
ccacgaggatatcaaggccctcagggacttcaaggttatgaaggtgatagaggaatacca
gggttagatggttgcagtggtgttgatggagtagtaggtcctcctggcaggagaggtatc
cctggcgaccgagggtttcctggtcttgaaggagagaaaggtctgccgggattggcgggt
gaaggaggctcaaactctagaggttcaaaaggagatcaaggagattatggccgcccaggg
actcctggctcacctgggcctgaaggttggagaggagatagtggcttacccggtgaagaa
ggagaccagggactaatgggcgtacgaggagaagcggggtatagaggagattatggtgac
gatgtggttggtcctccaggacaaaaaggagaccaaggtgaaaccggtgaaccagcaaga
cgaccatccgtaattgtcgacaacgaagtgcaacaaaatataacaataatcgctaaagga
tataaaggagagaaaggattgagaggacaacgcggtgaaaagggtatcaaaggaataacc
gggtccgttggtgcgccgggttccccgggtatcaatggtatacagggactaaaaggagaa
cagggtatagatggccctagaggtaaaccagggcatagaggtcaagacggaccacccgga
ctaaaaggcgacaaaggtgctccaggatatgttggccaagacggtttagatggtacacct
ggaggaagaggtgaagatggacggccaggaagtcctggtgtacaaggcccgatgggagaa
cctggcatatacgatcctagtttgaatgaaccattactgccaggttcgtctgggccacaa
ggtcctccagggctaacaggtccaaaaggagaagcgggtttagacggactgcgtggttat
ccaggtattataggtttacctgggttgcctggaaggaaaggaaaccctggacgacctgga
aatcctggtatttcacccaaaggagaaccaggaaacgatggtttcaaaggattacccggc
ccacgcggtccatctgggtacatcggtcttcctggacctatgggggttaaagggtttaaa
ggagcaacagtagtaggccctgacggtgaaggcggtatgccgggcttagatggcttaccc
ggaatgcgtggtgatcgtggtgagccaggatatatgggtccagctggatatccaggaatt
gggtggcgtgtaactggccctataggtgaaccgggtgaaccagggcctcctggacccgtc
ggagagcctggtcgttcaggacgtccaggtttctttggacctaaaggtgaacgaggagat
gactgcccctattgcaaatcaggactacctggagcaaaaggacaaagaggcgatgacggt
ttccctggactcaaaggagtgcctggaccagaaggtttaccaggagcacgcggcgttaat
ggccttcccggtaactctggaatcccaggacctaaagggccaaaaggcaataagggacaa
tctggcatggctggtccgcaagggcctagaggacaacatggcattgttaaaattccgcca
aaatcactaacaaaagcagaccgcggacctccgggagatgtaggttttattgggagggtc
ggtttacgtggagatcaagggtggccaggtcatcccggggactatggaccgaaagggatt
aaggggcgtttgggtgattatggcttccctggattgcctggtcgaaacggcacccgaggc
cgagacggtgcgccaggatggcctggtgcacccgctgatataccagccgccttcctcttt
ggtgaaaagggagatatgggcttgaaaggagacgccggtgaggcaggagatgacggtacg
cctggtgaagcaggagaatctgtaggaacgaatttggatgtcaaaggtttcaaaggagtt
gttggttttcccggaattaaaggcatccgcggaaggaaaggtgaccgtggtgacatgggt
tacgatggattcccaggaataagaggtgatgcaggttttcctggtggtactatacctggc
tccgttggtgtgagaggtcacagaggtgaaaagggagactttggaccttacggagaacct
ggtgcaactggtcaacaaggccctacaggatttcatgctggtaaaggacagaaaggatca
cggggagatattggagcatccatcattgtaggtgaacgtggtattgatggaacaccaggt
gaaccaggtgatataggagaagctggatattctggttctcctggacgtatgggcataatt
gggcctaagggtgaagtaggaccaccaggtgacgcaggatttgatggaccagtgggaccc
ccgggccgaaaaggaatccctggaatagaagtgcaaggcgcacgtggcatacctggtcga
ccagggttaccaggagtagttggacttatcggagatccaggaatgcaaggacctcatggc
ttacagggagatgaagggccaaaaggaatgaaaggagaagcaggtcgacgaggttttcgt
gggcgcccgggagatgaaggttctataggattccctggttttccaggtggaatcggaagt
ccagggttaccaggagaagatggtgatactggagaagctggcccgacaggtttccctgga
cgtcctggaagacaaggcttgattggggccccaggaatcaaaggcttccgcggtgatatt
ggacttccaggacctgtcggtatggatggatggcctggtctaaaaggagaaatcggtgat
atgggactgcccgggttaaaaggtcttccaggcgatagtggaattataggaatgaaagga
gattatggagaagctggttatgatggaagaataggtagacctggttataaaggatcagcc
ggagaaaagggagataggggctttccaggccaaactgtggtaggagatgctggtctcaag
ggttctgaaggtgacgaaggatacccgggtttagatggagttgttggaccaaagggaatt
atgggtgaccgtgggtatgatggtgatcggggtttaactggagataaaggttttcctggc
atacccggaccgccaggaagacgtggatttaatggagtaaaaggcgcaagaggttaccaa
ggttcaattgggtttaagggtattacaggagacaagggaatggagggagaaccaggtaaa
atgggcatgcctgggcttccaggagatcaagggtatgtcggtttacctgggctacaagga
gaaacaggaccaaaaggagagcgtggtgaacccggtcctagtgcatatttacctgcctcg
aagggtgacttaggagacatcggaatggacggtttacctggaattccaggagaaccaggg
gaaactggttactttggattgaaaggaaatcaaggtatcagaggtgacacaggtgaaaca
ggaatgacaggagattcaggatttgatggggcaaaaggaatgattggcgacataggccca
cctggacttcctggtttacctggacaaaatgccagacaaggtgagaaaggtagaccgggt
atagatggtctccctggatggcctggtccaatgggccaaaaaggagctcctggtgacttc
ggtattgaaggtcctattggagcacctggtatgcctggtctagtctttgaaggaccaaag
ggaatgaaaggcatggacggactaccagggcaacgtggtcttcctggggcacctggtgct
ccaggaatggaaggtgctcccggtgaacccggatttaagggggatattggtgaacctggt
tatgcaatcagtccaaaaggtgtacaaggaaatcctggatgggacggtttagtagggatg
actggtcttagaggcgatgcaggagatagcggttctaatggatatcccggaccacaagga
ttgagaggattgaaaggagaaatcggcgatgaaggtcaacaaggacctactggttcacca
gggccggacggtataaagggtgacacaggtgaccctcttccagaatcagaaattttacct
ggaatgaccggtgatgtgggtccatctggttttgatggccgtccaggctctgatggtatg
cctgggtcatttggaaaaaacggattgcccggtttaaaaggtatgagaggagacgtgggc
tttgtcggtcctgttgggcaaccgggagcaccagggttccaaggtatcaaaggtcgccaa
ggtgaaagaggttacgaaggcttacggggaagtataggtctcccaggattaccagcaccg
ccacctcccgtgccaagatcaagaggattttatttcactttacattctcaaacaagtatg
atcccgcagtgtccagatggcacctcacctctctggaatggattttctttaattcatatt
gttgcaaatgcaaaagctcatggacaagacttaggtgcaccaggaagctgtttgagaagg
ttctcaactatgccatacatgttttgtaatttgaacaatgtctgtgatttcgcacagaga
gaggactatagtttttggttatctacaccagaaccaatgcccatggccatgacaccaata
caggctagagacgttggaagctacatatccagatgtcaagtttgtgaatcaccaacgaga
accattgctatccatagtcaaagtaccgacgtaccttcctgtcccaacggttgggaaagg
ttgtggatcggatatagtttccttatgcatacagcgggcgcggatgcagcagggcagagc
ctgatttctcccgggtcttgtcttcgcgacttccgtacgagacctttcatcgagtgcaac
gggctgggccgatgcaactacttcgcaactgccgtctcgtattggctttcgaccattaac
gacgcaagaatgtttgataagcctgagcagcagacacttaaagctgaccaagtatctaaa
attagcagatgttccgtctgtatgaggcgaccaccaggttggaattcgggacaaggttca
ttcccgagtggagacgtaaactcggtgccaaacgcggtggtgcgccgccctgcgtaccgg
cggccgcgcctacgcggcgagtaccggcgcggcggccgcttagtgcggggaagacccagg
caataa
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