Oenococcus oeni: OEOE_0006
Help
Entry
OEOE_0006 CDS
T00408
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ooe
Oenococcus oeni
Brite
KEGG Orthology (KO) [BR:
ooe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ooe03032
]
OEOE_0006
03400 DNA repair and recombination proteins [BR:
ooe03400
]
OEOE_0006
Enzymes [BR:
ooe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OEOE_0006
DNA replication proteins [BR:
ooe03032
]
Prokaryotic type
DNA Topoisomerases
OEOE_0006
DNA repair and recombination proteins [BR:
ooe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OEOE_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HTH_37
Peptidase_S78
DUF5300
Motif
Other DBs
NCBI-ProteinID:
ABJ56011
UniProt:
Q04HR1
LinkDB
All DBs
Position
6068..8668
Genome browser
AA seq
866 aa
AA seq
DB search
MADEENNNFTPDSRIKDTDLNKTMRTSFLSYAMSVIVARALPDVRDGLKPVHRRILFGMN
ELGVTPDKPHKKSARIVGDVMGKFHPHGDSAIYESLVRMAQPFSYRYPLVDGHGNFGSVD
GDPAAAMRYTEARLSKIALEMLRDINKGTVDFQPSYDGDNREPVVLPSRFPNLLVNGAQG
IAVGMATNIPTHNLREVIAAIHVLMANPDATVADLMEALPGPDFPTGAIVMGKSGIRRAY
ETGRGSVTVRSKVDIETSSSGHERISVSELPYMVNKAKLIERIRELVLEKKLEGITAIRD
ESDQNGLRIAIDVGRDANANVVLNNLYKQTLLQTSFSFNMIAINHGKPETMSLKQILVAY
LEHQREIIRRRTEFDLKKAQDRAHILEGLRIALDHIDAIIELIRSSNTAEIAKNELINRY
QLSDKQAQAILDMRLVRLTGLERGKIETEYTDLLKSIEDFKDILAKPERIDQIIYQELLD
IANKFGDERRTELQVGDVSSIEDEDLIDEEEVLISLTHKGYIKRLSTSEFHTQNRGGRGV
KGMNTHDDDFVEQLVSTSTHDTLLFFSDQGKVYKMKGYEVPEYGRQAKGIPVINLLGLDA
GERVQAVINVRGDAATSKDFLFFTTKLGTVKRTAVSEFTNIRQLGLRAINLRDDDSLISV
LLTNGKQNIVIASHSGYAVSFAESDVRAMGRTASGVRGMNLRDKDYVVGADLLIPGDNVL
IITEKGYGKQTAVEEYPIRGRGGKGYKTSNISSKNGPLAGLAVVSGDEDIMITTDSGVMI
RFAAADVSITGRATLGVHVIKIEEGSKVATLAKVEKEEDEEIPATDQEEKVSLPTNQSDD
QIAEKIKKLADNQLKNSDDSDSKTSE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaagaaaacaacaatttcacaccggattcccgaatcaaggatactgattta
aataaaacaatgcggacaagctttttgtcctatgcgatgtcggttatcgttgcccgagct
ctaccggatgtccgcgatggtttgaaacctgtccaccgtcggattttatttggtatgaac
gaattaggtgttacgcccgacaaaccgcataaaaagtcagctcgtatcgtcggtgatgtc
atgggtaaatttcatccccacggggattcggcaatctatgagtccttggttcgaatggcc
cagccttttagctatcgctatccattagttgatggacatggaaactttggttcggtcgat
ggcgatccagccgcggcaatgcgttataccgaagcccgtttatcaaaaatagccttggaa
atgcttcgcgatatcaacaagggaaccgttgattttcaaccgagttatgatggcgataat
cgcgaaccagttgttttgccttcacgttttccaaatcttttagttaacggtgcacagggc
atcgccgttggaatggctacaaatattccaactcataatctccgtgaggtaattgcggca
atccatgttttgatggcgaatccggatgcgaccgttgctgatttaatggaagctctgcct
ggacctgattttcccactggagcgattgttatggggaagtcgggaattcgccgggcctac
gaaactggtcgtggttcagtgactgtccgttccaaagtcgatattgagacatcttcgtcc
ggtcatgaacgaatttccgtttccgaacttccttatatggttaacaaagccaaattaatt
gagcggattcgtgaattggttcttgaaaagaagcttgaaggtatcacggcgattcgtgat
gaatccgatcaaaatggtttgcggattgcaattgatgttggtcgtgatgccaacgccaac
gtggttttaaataatttatataaacaaacactgcttcaaacgagtttctcctttaatatg
atcgctattaatcatggcaagccggagacgatgagcttaaagcaaattcttgtagcctat
ttggaacaccaacgcgaaattattcgccgacggacagaatttgatttaaagaaagctcaa
gatcgtgctcatattcttgaaggcctgcgaattgctctggatcacattgatgcaattatt
gaactgattcgttccagtaataccgctgaaattgctaaaaatgaattgattaatcgttat
caattatccgataagcaggctcaggcaattttggatatgcgtttggttcggctaaccggt
ttggaacgcggaaaaatcgaaaccgaatataccgatttattaaaatcgattgaagacttc
aaagatattttggctaaacccgaacggatcgaccaaattatttatcaggaacttttggac
attgcaaataaatttggcgatgagcgtcggacggaattacaggttggcgatgtttcttca
attgaagacgaagatcttattgatgaagaagaagttcttatttctcttactcataaggga
tatataaaacgtctttcgactagcgagtttcatacacagaatcgtggtggccgtggtgtt
aagggaatgaatacccatgatgatgattttgtcgagcaacttgtttctacaagtactcat
gacactttgctgttcttctccgaccaaggaaaagtctacaaaatgaagggatatgaggta
ccggaatatggtcggcaagccaaaggaatcccggttattaacctccttgggcttgatgcc
ggcgaacgcgttcaggccgttataaatgttcgcggtgatgcggcaacttccaaagatttc
cttttctttacaacgaagttgggaactgtcaaacggacagctgtttccgagtttacaaat
attcgtcaattaggattaagagcaatcaatcttcgcgatgacgattccttgattagtgtc
ttattaactaatgggaaacagaacattgtgattgcatcacattccggctatgccgtttct
tttgccgaaagcgatgttcgagcaatgggccggacagcatccggcgtccgtggaatgaat
ttgcgtgataaggattatgttgttggagccgatttgttaattcctggcgacaatgttttg
attattaccgaaaaaggttatggtaagcagactgccgttgaagaatatccgattcgtggt
cgtggaggaaaaggttacaagacttccaatatttcatcgaaaaacggtcctctggccgga
ctagcggttgtttctggagacgaagatattatgattacaactgattccggagttatgatt
cgttttgctgctgctgatgtttcgattacgggccgggcaacgcttggtgttcatgtaatt
aaaattgaagagggttcaaaagtagctactttagccaaagtcgaaaaagaagaagacgaa
gaaattccggcaactgatcaagaagaaaaagtttctctgccaacaaatcagagtgatgat
cagattgcagaaaaaattaaaaaactggctgataaccaattaaagaattcagatgattct
gattcaaaaaccagtgagtaa
DBGET
integrated database retrieval system
