Oenococcus oeni: OEOE_0308
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Entry
OEOE_0308 CDS
T00408
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ooe
Oenococcus oeni
Brite
KEGG Orthology (KO) [BR:
ooe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ooe03400
]
OEOE_0308
Enzymes [BR:
ooe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OEOE_0308
DNA repair and recombination proteins [BR:
ooe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
OEOE_0308
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABJ56284
UniProt:
Q04GY8
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All DBs
Position
296671..300156
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AA seq
1161 aa
AA seq
DB search
MTLEIVRGFADRDFRSELLERIYEKYRIDPQARFFYIVPNHIKFSAEVDVLKKFGSLLGK
NDQEAQAFSRLQVYSLSRLAWALTKERDQKTIISNQSVSILVGQVLRELPIEKLNIFARS
ARMPGFVANVAEQLLEIWRSGLTASEILPLHQFDDRLSEKIKVLALIETKILPSLKDYSL
PDDALRNFATQISKIDLKNCNFYFEGFSGFTASELSLVKALISADRKTQLGKKSEIVFSL
TGEQQSDQYGEGNLFYRANQLFKNEFSSARVWIVSNIRPLSESQLNFEQSWRELETQGFT
SQKRSFPQTKIVVSSDQEHEIDFVARSIRQRLVDNPKLRAKDILVLAQRLDGYKNIIPKI
FDRYDLPYFLDKDTRMSDHPLASLAENLLGSSNEFAYERIMKIFRTGLLSWQLEDNFQTA
LDYLENYLLANNPKEKNWRQEEFQLIQISDEQDLNDDHKIDRQINALINRMRLFIIKILD
DFQEKFAKVENYHQAVKTLYNWLTDQQVDQVLLNQANDGDDRGQQTWKLLLSTLDEVDQL
IGDKKYSQKDFLQILKDGFAAASFSGIPASLDQITVSESGIVQRNDFKALYFIDASDASL
PAQTNSSSLIDDFDRLQLIDDFSKAQKPYYLQDTSRQEMTAENFRFYSSVLSATDSVTFS
YSKLRLDGKQNELSPYLRRLSLKNVSDLKIEKIPDLPQSQADLVDYLGTANSSAAILSQT
AQNFGEDFIDGLTDLLIKRNPYFQRILQALHYNNQPVTLRPELIKKLFGEDLRLSISQIE
KYYSNPYEYFLQYGLRLKKRNQFTVDAALSGTYYHSIFEQVINRLIGKRTDFHDLSDQEL
KKLSQESAQNLIELPDFQILQSDDHFRAVARSLTDDVLLTLKLMHRANRLNNSRPIKTEA
VFGKLSSDQQREQSLSGLDFTLANGRKIYLRGKVDRIDQQDLEHIFGTIIDYKSNGKVFD
FRDAYVGTELQLLTYWLALSKNSSRIGINQPGGAVFVQIRNKPADISQALAHQIQLDQLI
GDRAKQQVPDFQFHGILLDDQNYLANLQTVLAGQKAKYYNFGLTKKGQKTARSDLVSKED
LTVLLKHDEKKLVEAGNKIIHGEFPLYPIKKNEQRSALTYSDYTEIMNFDRNFGNQYNNL
TRYPKNKSELISKMREEEGEN
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgactttagaaatcgtcaggggttttgctgatagggattttcgcagtgaattattagaa
cgaatttatgaaaaataccggatcgatccccaggcgcgttttttttatattgttccaaac
catattaagttctctgccgaagtggacgttttaaagaaatttggttctttgttggggaaa
aatgatcaagaagcccaagctttttctcgtctacaggtttattcgttatcccgtctcgcc
tgggctttgaccaaagaacgcgaccaaaaaacaattatctccaaccagtctgtttcaatt
ctggttggacaggttttaagagaacttccgattgaaaaactgaatattttcgcccgttcg
gcacgaatgcctggttttgttgctaatgttgccgagcaattgttggagatttggcgttcg
ggcctgacagcaagcgaaattttgccccttcatcaatttgatgatcgtttatcggaaaaa
attaaagtacttgcgttaattgaaacaaaaatattgccgagtttgaaagattattcttta
cctgacgatgctctcagaaattttgccactcaaatcagcaagattgatttaaaaaattgc
aatttttacttcgagggcttttccggtttcacagcaagtgaattatcactcgtcaaggct
ttgatttcagcagatagaaaaacacaattgggcaaaaagtccgaaattgttttttcattg
acaggggaacagcagagcgatcaatatggggaagggaatttattttatagagccaatcaa
ctctttaaaaacgaattttcttcagcacgagtctggatcgtttccaacatccgcccacta
tccgagtcgcagctgaattttgagcagagttggcgcgagttggaaacacagggttttaca
agtcaaaagcgttctttcccacagactaagattgttgtcagcagcgatcaggaacatgaa
atcgactttgttgctcgctcgatcagacaacggttagttgataacccgaaattacgtgca
aaagacattctcgtacttgctcaaagacttgacggatataaaaatattattccaaaaatt
tttgatcgttatgatttgccttattttcttgataaagatacgcgtatgtctgatcatccg
cttgcttctttagccgagaacttattggggtcttctaatgagtttgcctatgaacgaatt
atgaaaattttccgaaccggtcttttgtcttggcagctagaggacaattttcaaacagct
ttggattatttggaaaattatttattggccaacaatccaaaagaaaaaaattggcgccaa
gaagaattccagctgattcagatttcagatgagcaggatttaaatgacgatcacaaaatc
gaccggcaaattaatgcattgattaatcgaatgcgtctttttataattaagattcttgac
gattttcaagaaaaattcgcaaaagtcgaaaattatcatcaagccgttaaaacactttat
aactggctgaccgatcaacaagttgaccaagttttgctcaatcaagctaatgatggagac
gatcgcggccagcaaacctggaaattgcttctttcgactttagacgaagtagatcaacta
atcggtgataaaaaatacagccaaaaagattttttgcaaattctaaaagacggttttgcc
gctgccagtttctccggtattcctgccagccttgatcaaattaccgtttccgaaagtgga
attgttcaaagaaatgattttaaagcgctttattttattgatgccagcgatgctagtctt
cccgctcaaactaattccagcagtttaatcgatgatttcgatcgtttgcaattaatcgat
gatttctcaaaagcacaaaaaccttactatcttcaggatactagccggcaggaaatgact
gctgaaaatttccgtttttactcttctgttttgtcggcgactgattcggttactttctcc
tattcgaaactgagacttgacggaaagcaaaatgagttatcaccttatttaaggcgcctt
tctttgaaaaatgtttctgaccttaagattgaaaaaattcccgatctgcctcaatcacaa
gccgatttggtcgattatttgggaacagcaaatagttcggctgccattttgagtcaaact
gcgcaaaattttggtgaagattttattgacggtctgacagatttgctgattaaacgcaat
ccctattttcaaaggatacttcaggcccttcattacaacaaccagccggttactttgcgg
ccggaattaattaaaaagttattcggtgaggatttaagactttctatttcccaaattgaa
aaatattacagcaatccttatgaatattttctccaatacggtctgcgactgaagaagcgt
aatcagttcacagtcgatgccgctttgtccggtacttattatcattcaatcttcgaacag
gttattaaccgtttaataggtaaaaggaccgattttcatgatttaagcgatcaggaattg
aaaaaactcagccaagaaagtgcccagaatttgatcgaattgcctgattttcaaattttg
cagtccgatgatcattttcgcgcagttgctcggagcctcactgatgacgttttgttaaca
ctgaaattaatgcacagggccaatcgattaaacaactctcgtccaattaaaacagaagcc
gtttttggaaaattgtcttctgaccaacagcgggagcaatctttatccggtcttgatttt
acgttggcaaatggtcgcaagatttatttgcgcggaaaggttgaccgaattgatcaacag
gatctggaacatatatttggcacgattattgattacaaatcgaatggaaaagtatttgat
tttcgcgatgcttatgtaggcacagaattgcagttattgacctactggcttgctttgtca
aagaatagttcacgcattggaatcaatcagcctggcggagccgtttttgtacagataaga
aacaaaccggctgacatttcccaagcgttggctcatcagatccaactagatcaacttatc
ggtgatcgggccaaacaacaggtgccggatttccaatttcatggtattttacttgatgat
cagaattatttagctaatttgcaaacggtcttggccggtcaaaaagccaaatattataat
ttcggtttaaccaaaaaaggtcaaaaaacggcacgaagcgatttggtttccaaagaagat
ttgaccgtcttactgaaacatgacgaaaaaaaattagtggaagccggtaacaaaatcatt
catggagaatttccgttatacccgattaaaaagaatgaacaaagaagcgctttaacatat
tctgattacacggaaattatgaattttgatagaaatttcggtaatcaatataataacttg
actcgttatccaaaaaataaaagtgaattgatttcaaaaatgcgcgaggaagaaggcgaa
aattaa
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